NPs Basic Information

Name
Penicibisabolane A
Molecular Formula C12H12O6
IUPAC Name*
2-(2-carboxyethyl)-2-methyl-1,3-benzodioxole-5-carboxylicacid
SMILES
CC1(CCC(=O)O)Oc2ccc(C(=O)O)cc2O1
InChI
InChI=1S/C12H12O6/c1-12(5-4-10(13)14)17-8-3-2-7(11(15)16)6-9(8)18-12/h2-3,6H,4-5H2,1H3,(H,13,14)(H,15,16)/t12-/m1/s1
InChIKey
QKHXDSYYPUWDLL-GFCCVEGCSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzodioxoles
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Benzodioxoles

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 252.22 ALogp: 1.7
HBD: 2 HBA: 4
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 93.1 Aromatic Rings: 2
Heavy Atoms: 18 QED Weighted: 0.854

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.665 MDCK Permeability: 0.00005950
Pgp-inhibitor: 0 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.004 20% Bioavailability (F20%): 0.023
30% Bioavailability (F30%): 0.988

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.122 Plasma Protein Binding (PPB): 79.80%
Volume Distribution (VD): 0.23 Fu: 10.97%

ADMET: Metabolism

CYP1A2-inhibitor: 0.019 CYP1A2-substrate: 0.087
CYP2C19-inhibitor: 0.032 CYP2C19-substrate: 0.044
CYP2C9-inhibitor: 0.011 CYP2C9-substrate: 0.163
CYP2D6-inhibitor: 0.043 CYP2D6-substrate: 0.097
CYP3A4-inhibitor: 0.028 CYP3A4-substrate: 0.03

ADMET: Excretion

Clearance (CL): 4.161 Half-life (T1/2): 0.91

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.359
Drug-inuced Liver Injury (DILI): 0.963 AMES Toxicity: 0.027
Rat Oral Acute Toxicity: 0.009 Maximum Recommended Daily Dose: 0.01
Skin Sensitization: 0.046 Carcinogencity: 0.089
Eye Corrosion: 0.036 Eye Irritation: 0.189
Respiratory Toxicity: 0.018
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005626 0.635 D06LHG 0.288
ENC005620 0.606 D0A6KR 0.287
ENC001626 0.406 D06VNK 0.278
ENC005711 0.388 D09BHB 0.263
ENC004158 0.386 D02AQY 0.261
ENC004350 0.379 D01WJL 0.258
ENC004187 0.377 D0C4YC 0.258
ENC004186 0.377 D00ENY 0.254
ENC003405 0.377 D0GY5Z 0.254
ENC004157 0.366 D0L7FM 0.250
*Note: the compound similarity was calculated by RDKIT.