NPs Basic Information

Name
Vaccinol R
Molecular Formula C17H22O5
IUPAC Name*
3-(2,3-dihydroxybutyl)-7-hydroxy-4-(3-methylbut-2-enyl)-3H-2-benzofuran-1-one
SMILES
CC(C)=CCc1ccc(O)c2c1C(CC(O)C(C)O)OC2=O
InChI
InChI=1S/C17H22O5/c1-9(2)4-5-11-6-7-12(19)16-15(11)14(22-17(16)21)8-13(20)10(3)18/h4,6-7,10,13-14,18-20H,5,8H2,1-3H3/t10-,13+,14?/m0/s1
InChIKey
HJNFAUOWGAUJJF-CMVMAMJTSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzofurans
        • Subclass: Benzofuranones
          • Direct Parent: Benzofuranones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 306.36 ALogp: 2.2
HBD: 3 HBA: 5
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 87.0 Aromatic Rings: 2
Heavy Atoms: 22 QED Weighted: 0.575

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.998 MDCK Permeability: 0.00000602
Pgp-inhibitor: 0.001 Pgp-substrate: 0.767
Human Intestinal Absorption (HIA): 0.092 20% Bioavailability (F20%): 0.02
30% Bioavailability (F30%): 0.439

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.032 Plasma Protein Binding (PPB): 90.72%
Volume Distribution (VD): 1.033 Fu: 8.80%

ADMET: Metabolism

CYP1A2-inhibitor: 0.714 CYP1A2-substrate: 0.336
CYP2C19-inhibitor: 0.024 CYP2C19-substrate: 0.119
CYP2C9-inhibitor: 0.109 CYP2C9-substrate: 0.913
CYP2D6-inhibitor: 0.317 CYP2D6-substrate: 0.295
CYP3A4-inhibitor: 0.027 CYP3A4-substrate: 0.083

ADMET: Excretion

Clearance (CL): 15.33 Half-life (T1/2): 0.71

ADMET: Toxicity

hERG Blockers: 0.005 Human Hepatotoxicity (H-HT): 0.801
Drug-inuced Liver Injury (DILI): 0.96 AMES Toxicity: 0.28
Rat Oral Acute Toxicity: 0.264 Maximum Recommended Daily Dose: 0.027
Skin Sensitization: 0.409 Carcinogencity: 0.416
Eye Corrosion: 0.003 Eye Irritation: 0.023
Respiratory Toxicity: 0.14
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004307 0.681 D0Z1WA 0.261
ENC004305 0.545 D0I8FI 0.253
ENC002190 0.544 D0K5CB 0.253
ENC004304 0.470 D08HUC 0.253
ENC003979 0.425 D02ZJI 0.253
ENC004306 0.414 D0SS4P 0.238
ENC003968 0.412 D0Q0PR 0.236
ENC004300 0.407 D06REO 0.229
ENC003327 0.400 D04KJO 0.229
ENC003356 0.396 D0Q1IT 0.229
*Note: the compound similarity was calculated by RDKIT.