NPs Basic Information

Name
(±)-(4S*,5S*)-2,4,5-trihydroxy-3-methoxy-4-methoxycarbonyl-5-methyl-2-cyclopenten-1-one
Molecular Formula C10H14O6
IUPAC Name*
methyl3,5-dihydroxy-2-methoxy-1,5-dimethyl-4-oxocyclopent-2-ene-1-carboxylate
SMILES
COC(=O)C1(C)C(OC)=C(O)C(=O)C1(C)O
InChI
InChI=1S/C10H14O6/c1-9(8(13)16-4)7(15-3)5(11)6(12)10(9,2)14/h11,14H,1-4H3/t9-,10+/m0/s1
InChIKey
JTDJQRXWTIHNFF-VHSXEESVSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Acyloins

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 230.22 ALogp: -0.1
HBD: 2 HBA: 6
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 93.1 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.664

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.117 MDCK Permeability: 0.00013389
Pgp-inhibitor: 0.289 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.043 20% Bioavailability (F20%): 0.121
30% Bioavailability (F30%): 0.977

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.926 Plasma Protein Binding (PPB): 19.63%
Volume Distribution (VD): 0.26 Fu: 77.94%

ADMET: Metabolism

CYP1A2-inhibitor: 0.011 CYP1A2-substrate: 0.952
CYP2C19-inhibitor: 0.017 CYP2C19-substrate: 0.856
CYP2C9-inhibitor: 0.003 CYP2C9-substrate: 0.04
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.125
CYP3A4-inhibitor: 0.006 CYP3A4-substrate: 0.53

ADMET: Excretion

Clearance (CL): 3.542 Half-life (T1/2): 0.342

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.122
Drug-inuced Liver Injury (DILI): 0.845 AMES Toxicity: 0.558
Rat Oral Acute Toxicity: 0.038 Maximum Recommended Daily Dose: 0.007
Skin Sensitization: 0.291 Carcinogencity: 0.019
Eye Corrosion: 0.008 Eye Irritation: 0.031
Respiratory Toxicity: 0.122
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004962 0.364 D06TQZ 0.236
ENC004059 0.333 D0WY9N 0.208
ENC002328 0.319 D0H6VY 0.206
ENC002329 0.319 D0U4VT 0.204
ENC004961 0.303 D0G6AB 0.200
ENC005590 0.298 D04GJN 0.200
ENC006072 0.297 D0A7MY 0.200
ENC005591 0.287 D0E9KA 0.196
ENC004953 0.280 D0U0OT 0.194
ENC004963 0.278 D0C1SF 0.193
*Note: the compound similarity was calculated by RDKIT.