NPs Basic Information

Name
5S,6S-phomalactone
Molecular Formula C8H10O3
IUPAC Name*
3-hydroxy-2-prop-1-enyl-2,3-dihydropyran-6-one
SMILES
CC=CC1OC(=O)C=CC1O
InChI
InChI=1S/C8H10O3/c1-2-3-7-6(9)4-5-8(10)11-7/h2-7,9H,1H3/b3-2+/t6-,7-/m0/s1
InChIKey
OKDRUMBNXIYUEO-VHJVCUAWSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Dihydropyranones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 154.16 ALogp: 0.4
HBD: 1 HBA: 3
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 1
Heavy Atoms: 11 QED Weighted: 0.449

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.606 MDCK Permeability: 0.00002340
Pgp-inhibitor: 0.001 Pgp-substrate: 0.965
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.509
30% Bioavailability (F30%): 0.985

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.12 Plasma Protein Binding (PPB): 87.59%
Volume Distribution (VD): 0.453 Fu: 25.05%

ADMET: Metabolism

CYP1A2-inhibitor: 0.887 CYP1A2-substrate: 0.923
CYP2C19-inhibitor: 0.396 CYP2C19-substrate: 0.126
CYP2C9-inhibitor: 0.103 CYP2C9-substrate: 0.912
CYP2D6-inhibitor: 0.366 CYP2D6-substrate: 0.816
CYP3A4-inhibitor: 0.054 CYP3A4-substrate: 0.203

ADMET: Excretion

Clearance (CL): 13.507 Half-life (T1/2): 0.859

ADMET: Toxicity

hERG Blockers: 0.016 Human Hepatotoxicity (H-HT): 0.404
Drug-inuced Liver Injury (DILI): 0.878 AMES Toxicity: 0.159
Rat Oral Acute Toxicity: 0.27 Maximum Recommended Daily Dose: 0.017
Skin Sensitization: 0.418 Carcinogencity: 0.684
Eye Corrosion: 0.859 Eye Irritation: 0.967
Respiratory Toxicity: 0.38
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D0L1WV 0.197
D0Z8EX 0.175
D0K7LU 0.162
D03KXY 0.154
D0WE3O 0.154
D0X7JN 0.153
D0CL9S 0.152
D0Y7DP 0.152
D07XSN 0.152
D03TGJ 0.151
*Note: the compound similarity was calculated by RDKIT.