NPs Basic Information

Name
Endostemonine F
Molecular Formula C12H17NO5
IUPAC Name*
3-hydroxy-5-(4-methyl-1H-pyrrole-2-carbonyl)oxyhexanoicacid
SMILES
Cc1c[nH]c(C(=O)OC(C)CC(O)CC(=O)O)c1
InChI
InChI=1S/C12H17NO5/c1-7-3-10(13-6-7)12(17)18-8(2)4-9(14)5-11(15)16/h3,6,8-9,13-14H,4-5H2,1-2H3,(H,15,16)/t8-,9-/m1/s1
InChIKey
NAWMSFXAOXUHSC-RKDXNWHRSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Hydroxy acids and derivat
        • Subclass: Medium-chain hydroxy acid
          • Direct Parent: Medium-chain hydroxy acid

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 255.27 ALogp: 1.1
HBD: 3 HBA: 4
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 99.6 Aromatic Rings: 1
Heavy Atoms: 18 QED Weighted: 0.669

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.15 MDCK Permeability: 0.00011717
Pgp-inhibitor: 0 Pgp-substrate: 0.015
Human Intestinal Absorption (HIA): 0.013 20% Bioavailability (F20%): 0.002
30% Bioavailability (F30%): 0.969

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.567 Plasma Protein Binding (PPB): 36.66%
Volume Distribution (VD): 0.189 Fu: 50.52%

ADMET: Metabolism

CYP1A2-inhibitor: 0.063 CYP1A2-substrate: 0.093
CYP2C19-inhibitor: 0.031 CYP2C19-substrate: 0.065
CYP2C9-inhibitor: 0.009 CYP2C9-substrate: 0.968
CYP2D6-inhibitor: 0.03 CYP2D6-substrate: 0.206
CYP3A4-inhibitor: 0.018 CYP3A4-substrate: 0.115

ADMET: Excretion

Clearance (CL): 11.377 Half-life (T1/2): 0.907

ADMET: Toxicity

hERG Blockers: 0.005 Human Hepatotoxicity (H-HT): 0.293
Drug-inuced Liver Injury (DILI): 0.368 AMES Toxicity: 0.006
Rat Oral Acute Toxicity: 0.03 Maximum Recommended Daily Dose: 0.732
Skin Sensitization: 0.119 Carcinogencity: 0.066
Eye Corrosion: 0.228 Eye Irritation: 0.93
Respiratory Toxicity: 0.107
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005077 0.760 D02RQU 0.277
ENC005083 0.649 D00WUF 0.267
ENC005081 0.649 D0RA5Q 0.244
ENC005085 0.587 D0HD9K 0.242
ENC005078 0.458 D01MML 0.239
ENC005080 0.457 D0JE2E 0.236
ENC005086 0.421 D08GHB 0.236
ENC005079 0.394 D03KIA 0.234
ENC005084 0.361 D07SJT 0.229
ENC002155 0.324 D0I5HV 0.222
*Note: the compound similarity was calculated by RDKIT.