NPs Basic Information

Name
seco-secopatulolide C
Molecular Formula C12H22O4
IUPAC Name*
4,11-dihydroxydodec-2-enoicacid
SMILES
CC(O)CCCCCCC(O)C=CC(=O)O
InChI
InChI=1S/C12H22O4/c1-10(13)6-4-2-3-5-7-11(14)8-9-12(15)16/h8-11,13-14H,2-7H2,1H3,(H,15,16)/b9-8+/t10-,11+/m1/s1
InChIKey
NNXXCBGYPOEXLL-OJLMFNQTSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Hydroxy acids and derivat
        • Subclass: Medium-chain hydroxy acid
          • Direct Parent: Medium-chain hydroxy acid

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 230.3 ALogp: 1.7
HBD: 3 HBA: 3
Rotatable Bonds: 9 Lipinski's rule of five: Accepted
Polar Surface Area: 77.8 Aromatic Rings: 0
Heavy Atoms: 16 QED Weighted: 0.419

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.207 MDCK Permeability: 0.00002260
Pgp-inhibitor: 0.412 Pgp-substrate: 0.065
Human Intestinal Absorption (HIA): 0.165 20% Bioavailability (F20%): 0.14
30% Bioavailability (F30%): 0.018

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.896 Plasma Protein Binding (PPB): 55.94%
Volume Distribution (VD): 0.269 Fu: 44.33%

ADMET: Metabolism

CYP1A2-inhibitor: 0.018 CYP1A2-substrate: 0.263
CYP2C19-inhibitor: 0.015 CYP2C19-substrate: 0.061
CYP2C9-inhibitor: 0.009 CYP2C9-substrate: 0.972
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.247
CYP3A4-inhibitor: 0.006 CYP3A4-substrate: 0.029

ADMET: Excretion

Clearance (CL): 6.947 Half-life (T1/2): 0.866

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.213
Drug-inuced Liver Injury (DILI): 0.054 AMES Toxicity: 0.05
Rat Oral Acute Toxicity: 0.003 Maximum Recommended Daily Dose: 0.079
Skin Sensitization: 0.068 Carcinogencity: 0.032
Eye Corrosion: 0.445 Eye Irritation: 0.804
Respiratory Toxicity: 0.03
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D0I4DQ 0.366
D0N3NO 0.330
D0D9NY 0.325
D06FEA 0.318
D0V0IX 0.314
D0E4WR 0.300
D0Z5BC 0.295
D0FD0H 0.264
D04RGA 0.257
D0ZI4H 0.245
*Note: the compound similarity was calculated by RDKIT.