NPs Basic Information

Name
Phomomane
Molecular Formula C15H26O3
IUPAC Name*
4,5-dihydroxy-4,8a-dimethyl-6-propan-2-yl-3,4a,5,6,7,8-hexahydro-2H-naphthalen-1-one
SMILES
CC(C)C1CCC2(C)C(=O)CCC(C)(O)C2C1O
InChI
InChI=1S/C15H26O3/c1-9(2)10-5-7-14(3)11(16)6-8-15(4,18)13(14)12(10)17/h9-10,12-13,17-18H,5-8H2,1-4H3/t10-,12-,13+,14-,15+/m1/s1
InChIKey
TWXJOBQSLRCOQR-LFHLZQBKSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Eudesmane, isoeudesmane o

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 254.37 ALogp: 2.1
HBD: 2 HBA: 3
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 57.5 Aromatic Rings: 2
Heavy Atoms: 18 QED Weighted: 0.756

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.568 MDCK Permeability: 0.00001940
Pgp-inhibitor: 0.004 Pgp-substrate: 0.01
Human Intestinal Absorption (HIA): 0.01 20% Bioavailability (F20%): 0.245
30% Bioavailability (F30%): 0.146

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.974 Plasma Protein Binding (PPB): 73.77%
Volume Distribution (VD): 0.749 Fu: 29.73%

ADMET: Metabolism

CYP1A2-inhibitor: 0.014 CYP1A2-substrate: 0.532
CYP2C19-inhibitor: 0.019 CYP2C19-substrate: 0.913
CYP2C9-inhibitor: 0.036 CYP2C9-substrate: 0.733
CYP2D6-inhibitor: 0.003 CYP2D6-substrate: 0.232
CYP3A4-inhibitor: 0.064 CYP3A4-substrate: 0.449

ADMET: Excretion

Clearance (CL): 14.595 Half-life (T1/2): 0.707

ADMET: Toxicity

hERG Blockers: 0.01 Human Hepatotoxicity (H-HT): 0.374
Drug-inuced Liver Injury (DILI): 0.076 AMES Toxicity: 0.171
Rat Oral Acute Toxicity: 0.219 Maximum Recommended Daily Dose: 0.026
Skin Sensitization: 0.039 Carcinogencity: 0.032
Eye Corrosion: 0.003 Eye Irritation: 0.031
Respiratory Toxicity: 0.473
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004915 0.481 D0K0EK 0.325
ENC003266 0.481 D04CSZ 0.310
ENC002017 0.429 D0H1QY 0.288
ENC005930 0.415 D0L2LS 0.287
ENC005929 0.415 D0Z1XD 0.286
ENC005928 0.415 D04GJN 0.278
ENC003050 0.394 D0I2SD 0.278
ENC003125 0.385 D06XMU 0.277
ENC002278 0.382 D01CKY 0.275
ENC001779 0.373 D0D2VS 0.271
*Note: the compound similarity was calculated by RDKIT.