NPs Basic Information

Name
Xylarioxide A
Molecular Formula C15H28O4
IUPAC Name*
3-(1,2-dihydroxypropan-2-yl)-4a,5-dimethyl-1,2,3,4,5,6,7,8-octahydronaphthalene-1,8a-diol
SMILES
CC1CCCC2(O)C(O)CC(C(C)(O)CO)CC12C
InChI
InChI=1S/C15H28O4/c1-10-5-4-6-15(19)12(17)7-11(8-13(10,15)2)14(3,18)9-16/h10-12,16-19H,4-9H2,1-3H3/t10-,11-,12-,13+,14-,15+/m0/s1
InChIKey
JVZXAGYFXIOGAE-CTTWBBHYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Eremophilane, 8,9-secoere

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 272.38 ALogp: 1.1
HBD: 4 HBA: 4
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 80.9 Aromatic Rings: 2
Heavy Atoms: 19 QED Weighted: 0.614

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.734 MDCK Permeability: 0.00002830
Pgp-inhibitor: 0.001 Pgp-substrate: 0.009
Human Intestinal Absorption (HIA): 0.069 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.004

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.973 Plasma Protein Binding (PPB): 67.62%
Volume Distribution (VD): 1.05 Fu: 32.16%

ADMET: Metabolism

CYP1A2-inhibitor: 0.013 CYP1A2-substrate: 0.211
CYP2C19-inhibitor: 0.01 CYP2C19-substrate: 0.828
CYP2C9-inhibitor: 0.017 CYP2C9-substrate: 0.253
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.221
CYP3A4-inhibitor: 0.049 CYP3A4-substrate: 0.223

ADMET: Excretion

Clearance (CL): 7.248 Half-life (T1/2): 0.529

ADMET: Toxicity

hERG Blockers: 0.032 Human Hepatotoxicity (H-HT): 0.209
Drug-inuced Liver Injury (DILI): 0.027 AMES Toxicity: 0.022
Rat Oral Acute Toxicity: 0.086 Maximum Recommended Daily Dose: 0.07
Skin Sensitization: 0.248 Carcinogencity: 0.029
Eye Corrosion: 0.003 Eye Irritation: 0.041
Respiratory Toxicity: 0.031
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004725 0.515 D07QKN 0.302
ENC004723 0.515 D07DVK 0.276
ENC004726 0.515 D0IT2G 0.276
ENC004724 0.515 D0CW1P 0.276
ENC003786 0.493 D08PIQ 0.268
ENC003658 0.471 D0R7JT 0.255
ENC003599 0.471 D0FL5V 0.250
ENC004727 0.463 D03HYX 0.250
ENC004728 0.463 D03BLF 0.250
ENC002684 0.463 D0L2LS 0.250
*Note: the compound similarity was calculated by RDKIT.