NPs Basic Information

Name
Nigirpexin A
Molecular Formula C15H16O3
IUPAC Name*
(3S)-8-hydroxy-7-methyl-3-[(1E,3E)-penta-1,3-dienyl]-3,4-dihydroisochromen-1-one
SMILES
C/C=C/C=C/[C@@H]1CC2=C(C(=C(C=C2)C)O)C(=O)O1
InChI
InChI=1S/C15H16O3/c1-3-4-5-6-12-9-11-8-7-10(2)14(16)13(11)15(17)18-12/h3-8,12,16H,9H2,1-2H3/b4-3+,6-5+/t12-/m1/s1
InChIKey
IOUZLGAJKCJHJT-KANVGOIPSA-N
Synonyms
Nigirpexin A
CAS NA
PubChem CID 146684394
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 2-benzopyrans
          • Direct Parent: 2-benzopyrans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 244.28 ALogp: 3.9
HBD: 1 HBA: 3
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 2
Heavy Atoms: 18 QED Weighted: 0.637

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.671 MDCK Permeability: 0.00001840
Pgp-inhibitor: 0.002 Pgp-substrate: 0.22
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.008
30% Bioavailability (F30%): 0.582

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.177 Plasma Protein Binding (PPB): 94.63%
Volume Distribution (VD): 0.742 Fu: 5.42%

ADMET: Metabolism

CYP1A2-inhibitor: 0.942 CYP1A2-substrate: 0.93
CYP2C19-inhibitor: 0.838 CYP2C19-substrate: 0.309
CYP2C9-inhibitor: 0.599 CYP2C9-substrate: 0.974
CYP2D6-inhibitor: 0.863 CYP2D6-substrate: 0.918
CYP3A4-inhibitor: 0.697 CYP3A4-substrate: 0.236

ADMET: Excretion

Clearance (CL): 7.552 Half-life (T1/2): 0.194

ADMET: Toxicity

hERG Blockers: 0.016 Human Hepatotoxicity (H-HT): 0.383
Drug-inuced Liver Injury (DILI): 0.838 AMES Toxicity: 0.491
Rat Oral Acute Toxicity: 0.498 Maximum Recommended Daily Dose: 0.459
Skin Sensitization: 0.785 Carcinogencity: 0.919
Eye Corrosion: 0.115 Eye Irritation: 0.962
Respiratory Toxicity: 0.73
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004211 0.485 D0L1WV 0.253
ENC003997 0.421 D04JHN 0.236
ENC002309 0.419 D06XWB 0.235
ENC006091 0.415 D02NSF 0.231
ENC003393 0.373 D0H6QU 0.230
ENC002082 0.365 D0N0OU 0.226
ENC000584 0.365 D03SKD 0.223
ENC003840 0.365 D07MGA 0.220
ENC000856 0.365 D0X3FX 0.216
ENC004880 0.364 D0X5KF 0.215
*Note: the compound similarity was calculated by RDKIT.