NPs Basic Information

Name
Cylindrocarpone B
Molecular Formula C14H12O7
IUPAC Name*
4,6,11,12-tetrahydroxy-8-methoxy-10-methyl-3-oxatricyclo[7.3.1.05,13]trideca-1(12),5(13),6,8,10-pentaen-2-one
SMILES
CC1=C(C(=C2C3=C(C(OC2=O)O)C(=CC(=C13)OC)O)O)O
InChI
InChI=1S/C14H12O7/c1-4-7-6(20-2)3-5(15)8-9(7)10(12(17)11(4)16)14(19)21-13(8)18/h3,13,15-18H,1-2H3
InChIKey
RMKIYSBIGZPJDJ-UHFFFAOYSA-N
Synonyms
Cylindrocarpone B
CAS NA
PubChem CID 146684368
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Naphthalenes
        • Subclass: Naphthols and derivatives
          • Direct Parent: Naphthols and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 292.24 ALogp: 1.9
HBD: 4 HBA: 7
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 116.0 Aromatic Rings: 3
Heavy Atoms: 21 QED Weighted: 0.469

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.495 MDCK Permeability: 0.00000416
Pgp-inhibitor: 0.002 Pgp-substrate: 0.506
Human Intestinal Absorption (HIA): 0.509 20% Bioavailability (F20%): 0.01
30% Bioavailability (F30%): 0.296

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.019 Plasma Protein Binding (PPB): 94.49%
Volume Distribution (VD): 0.93 Fu: 10.02%

ADMET: Metabolism

CYP1A2-inhibitor: 0.361 CYP1A2-substrate: 0.853
CYP2C19-inhibitor: 0.029 CYP2C19-substrate: 0.193
CYP2C9-inhibitor: 0.135 CYP2C9-substrate: 0.685
CYP2D6-inhibitor: 0.16 CYP2D6-substrate: 0.18
CYP3A4-inhibitor: 0.078 CYP3A4-substrate: 0.081

ADMET: Excretion

Clearance (CL): 6.123 Half-life (T1/2): 0.885

ADMET: Toxicity

hERG Blockers: 0.002 Human Hepatotoxicity (H-HT): 0.034
Drug-inuced Liver Injury (DILI): 0.913 AMES Toxicity: 0.691
Rat Oral Acute Toxicity: 0.038 Maximum Recommended Daily Dose: 0.823
Skin Sensitization: 0.628 Carcinogencity: 0.096
Eye Corrosion: 0.012 Eye Irritation: 0.936
Respiratory Toxicity: 0.173
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004200 0.692 D07MGA 0.330
ENC004202 0.580 D06GCK 0.302
ENC004924 0.557 D0K8KX 0.275
ENC003702 0.463 D0AZ8C 0.273
ENC002003 0.418 D01XWG 0.262
ENC005911 0.403 D07VLY 0.256
ENC005912 0.403 D0C9XJ 0.256
ENC004367 0.403 D04AIT 0.253
ENC002107 0.402 D04TDQ 0.248
ENC004991 0.400 D0WY9N 0.241
*Note: the compound similarity was calculated by RDKIT.