NPs Basic Information

Name
(-)-nigrosporione A
Molecular Formula C9H12O4
IUPAC Name*
(3R,3aR,6aR)-3-hydroxy-4-methoxy-6a-methyl-3,3a-dihydro-1H-cyclopenta[c]furan-6-one
SMILES
C[C@]12CO[C@H]([C@H]1C(=CC2=O)OC)O
InChI
InChI=1S/C9H12O4/c1-9-4-13-8(11)7(9)5(12-2)3-6(9)10/h3,7-8,11H,4H2,1-2H3/t7-,8-,9-/m1/s1
InChIKey
PBCAFSVBCMHJCT-IWSPIJDZSA-N
Synonyms
(-)-nigrosporione A
CAS NA
PubChem CID 146684211
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Tetrahydrofurans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Tetrahydrofurans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 184.19 ALogp: -0.5
HBD: 1 HBA: 4
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 55.8 Aromatic Rings: 2
Heavy Atoms: 13 QED Weighted: 0.643

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.914 MDCK Permeability: 0.00003490
Pgp-inhibitor: 0.003 Pgp-substrate: 0.949
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.041
30% Bioavailability (F30%): 0.008

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.899 Plasma Protein Binding (PPB): 34.46%
Volume Distribution (VD): 1.386 Fu: 73.97%

ADMET: Metabolism

CYP1A2-inhibitor: 0.019 CYP1A2-substrate: 0.624
CYP2C19-inhibitor: 0.024 CYP2C19-substrate: 0.848
CYP2C9-inhibitor: 0.012 CYP2C9-substrate: 0.078
CYP2D6-inhibitor: 0.003 CYP2D6-substrate: 0.098
CYP3A4-inhibitor: 0.023 CYP3A4-substrate: 0.61

ADMET: Excretion

Clearance (CL): 3.251 Half-life (T1/2): 0.844

ADMET: Toxicity

hERG Blockers: 0.005 Human Hepatotoxicity (H-HT): 0.154
Drug-inuced Liver Injury (DILI): 0.929 AMES Toxicity: 0.277
Rat Oral Acute Toxicity: 0.483 Maximum Recommended Daily Dose: 0.772
Skin Sensitization: 0.852 Carcinogencity: 0.364
Eye Corrosion: 0.917 Eye Irritation: 0.988
Respiratory Toxicity: 0.954
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D06XMU 0.205
D0A2AJ 0.197
D03SKD 0.190
D0K0EK 0.190
D0R9VR 0.188
D0Z1XD 0.185
D04SFH 0.184
D0L1WV 0.183
D0K7LU 0.183
D03DIG 0.181
*Note: the compound similarity was calculated by RDKIT.