NPs Basic Information

Name
Leptosphin B
Molecular Formula C15H20O4
IUPAC Name*
2-[(3S,4R)-4-(2-ethenyl-4,4-dimethylcyclopenten-1-yl)-2-oxooxolan-3-yl]acetic acid
SMILES
CC1(CC(=C(C1)[C@@H]2COC(=O)[C@H]2CC(=O)O)C=C)C
InChI
InChI=1S/C15H20O4/c1-4-9-6-15(2,3)7-11(9)12-8-19-14(18)10(12)5-13(16)17/h4,10,12H,1,5-8H2,2-3H3,(H,16,17)/t10-,12+/m0/s1
InChIKey
VCZFVDKNJCQIKO-CMPLNLGQSA-N
Synonyms
Leptosphin B
CAS NA
PubChem CID 146683427
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Lactones
        • Subclass: Gamma butyrolactones
          • Direct Parent: Gamma butyrolactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 264.32 ALogp: 1.6
HBD: 1 HBA: 4
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 63.6 Aromatic Rings: 2
Heavy Atoms: 19 QED Weighted: 0.791

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.148 MDCK Permeability: 0.00003170
Pgp-inhibitor: 0 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.031 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.001

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.015 Plasma Protein Binding (PPB): 96.00%
Volume Distribution (VD): 0.243 Fu: 1.89%

ADMET: Metabolism

CYP1A2-inhibitor: 0.022 CYP1A2-substrate: 0.248
CYP2C19-inhibitor: 0.022 CYP2C19-substrate: 0.087
CYP2C9-inhibitor: 0.142 CYP2C9-substrate: 0.962
CYP2D6-inhibitor: 0.012 CYP2D6-substrate: 0.278
CYP3A4-inhibitor: 0.029 CYP3A4-substrate: 0.155

ADMET: Excretion

Clearance (CL): 3.344 Half-life (T1/2): 0.86

ADMET: Toxicity

hERG Blockers: 0.005 Human Hepatotoxicity (H-HT): 0.395
Drug-inuced Liver Injury (DILI): 0.439 AMES Toxicity: 0.005
Rat Oral Acute Toxicity: 0.852 Maximum Recommended Daily Dose: 0.089
Skin Sensitization: 0.186 Carcinogencity: 0.763
Eye Corrosion: 0.004 Eye Irritation: 0.018
Respiratory Toxicity: 0.618
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000333 0.273 D04VIS 0.227
ENC005663 0.272 D06HLY 0.224
ENC003143 0.268 D0F2AK 0.216
ENC002902 0.262 D0G6AB 0.215
ENC005547 0.262 D04ATM 0.212
ENC005986 0.258 D0IX6I 0.208
ENC003682 0.256 D0IL7L 0.208
ENC003613 0.253 D08BYK 0.208
ENC003795 0.253 D0M1VC 0.204
ENC002578 0.250 D0I5DS 0.204
*Note: the compound similarity was calculated by RDKIT.