NPs Basic Information

Name
Paralactonic acid D
Molecular Formula C12H16O6
IUPAC Name*
3-[(2S,3S)-5-(2-carboxyethyl)-3-methyl-6-oxo-2,3-dihydropyran-2-yl]propanoic acid
SMILES
C[C@H]1C=C(C(=O)O[C@H]1CCC(=O)O)CCC(=O)O
InChI
InChI=1S/C12H16O6/c1-7-6-8(2-4-10(13)14)12(17)18-9(7)3-5-11(15)16/h6-7,9H,2-5H2,1H3,(H,13,14)(H,15,16)/t7-,9-/m0/s1
InChIKey
STMLBESERUTGPE-CBAPKCEASA-N
Synonyms
Paralactonic acid D
CAS NA
PubChem CID 146683308
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Tricarboxylic acids and d
          • Direct Parent: Tricarboxylic acids and d

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 256.25 ALogp: 0.7
HBD: 2 HBA: 6
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 101.0 Aromatic Rings: 1
Heavy Atoms: 18 QED Weighted: 0.701

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.9 MDCK Permeability: 0.00040344
Pgp-inhibitor: 0.001 Pgp-substrate: 0.244
Human Intestinal Absorption (HIA): 0.065 20% Bioavailability (F20%): 0.007
30% Bioavailability (F30%): 0.55

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.142 Plasma Protein Binding (PPB): 58.77%
Volume Distribution (VD): 0.2 Fu: 46.75%

ADMET: Metabolism

CYP1A2-inhibitor: 0.009 CYP1A2-substrate: 0.052
CYP2C19-inhibitor: 0.024 CYP2C19-substrate: 0.042
CYP2C9-inhibitor: 0.004 CYP2C9-substrate: 0.974
CYP2D6-inhibitor: 0.015 CYP2D6-substrate: 0.133
CYP3A4-inhibitor: 0.014 CYP3A4-substrate: 0.036

ADMET: Excretion

Clearance (CL): 4.361 Half-life (T1/2): 0.862

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.613
Drug-inuced Liver Injury (DILI): 0.591 AMES Toxicity: 0.159
Rat Oral Acute Toxicity: 0.019 Maximum Recommended Daily Dose: 0.106
Skin Sensitization: 0.32 Carcinogencity: 0.392
Eye Corrosion: 0.778 Eye Irritation: 0.113
Respiratory Toxicity: 0.089
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004112 0.545 D06VNK 0.360
ENC004110 0.470 D0E4WR 0.317
ENC000062 0.360 D0Y7ZD 0.268
ENC004111 0.356 D0O4GY 0.263
ENC005800 0.350 D00ENY 0.259
ENC005801 0.348 D0Z0MG 0.246
ENC003677 0.344 D03CEF 0.232
ENC003800 0.322 D07SJT 0.229
ENC000075 0.317 D0W5BS 0.224
ENC005799 0.313 D0EP8X 0.222
*Note: the compound similarity was calculated by RDKIT.