NPs Basic Information

Name
Cytorhizin C
Molecular Formula C23H26O7
IUPAC Name*
(1R,9R,17R,20R)-17-(methoxymethyl)-13,16,16,20-tetramethyl-2,15,18-trioxapentacyclo[8.8.1.11,9.03,8.014,19]icosa-3,5,7,10,12,14(19)-hexaene-7,9,11-triol
SMILES
C[C@@H]1[C@@]2(C3=C(C=CC=C3O[C@@]14C5=C(C(=CC(=C52)O)C)OC([C@H](O4)COC)(C)C)O)O
InChI
InChI=1S/C23H26O7/c1-11-9-14(25)18-19-20(11)30-21(3,4)16(10-27-5)29-23(19)12(2)22(18,26)17-13(24)7-6-8-15(17)28-23/h6-9,12,16,24-26H,10H2,1-5H3/t12-,16-,22+,23+/m1/s1
InChIKey
YYCBINHRVTVOMP-OHGMMELBSA-N
Synonyms
Cytorhizin C
CAS NA
PubChem CID 146683154
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzoxepines
        • Subclass: Dibenzoxepines
          • Direct Parent: Dibenzoxepines

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 414.4 ALogp: 2.4
HBD: 3 HBA: 7
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 97.6 Aromatic Rings: 5
Heavy Atoms: 30 QED Weighted: 0.687

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.008 MDCK Permeability: 0.00001530
Pgp-inhibitor: 0.053 Pgp-substrate: 0.817
Human Intestinal Absorption (HIA): 0.055 20% Bioavailability (F20%): 0.028
30% Bioavailability (F30%): 0.856

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.13 Plasma Protein Binding (PPB): 93.73%
Volume Distribution (VD): 0.653 Fu: 4.16%

ADMET: Metabolism

CYP1A2-inhibitor: 0.023 CYP1A2-substrate: 0.882
CYP2C19-inhibitor: 0.035 CYP2C19-substrate: 0.746
CYP2C9-inhibitor: 0.213 CYP2C9-substrate: 0.164
CYP2D6-inhibitor: 0.018 CYP2D6-substrate: 0.136
CYP3A4-inhibitor: 0.446 CYP3A4-substrate: 0.779

ADMET: Excretion

Clearance (CL): 4.992 Half-life (T1/2): 0.789

ADMET: Toxicity

hERG Blockers: 0.036 Human Hepatotoxicity (H-HT): 0.901
Drug-inuced Liver Injury (DILI): 0.19 AMES Toxicity: 0.533
Rat Oral Acute Toxicity: 0.869 Maximum Recommended Daily Dose: 0.942
Skin Sensitization: 0.919 Carcinogencity: 0.335
Eye Corrosion: 0.003 Eye Irritation: 0.444
Respiratory Toxicity: 0.324
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004105 0.857 D07MGA 0.243
ENC004103 0.851 D0Q0PR 0.241
ENC004102 0.731 D08NQZ 0.239
ENC002008 0.308 D0J2NK 0.235
ENC004154 0.297 D0S0LZ 0.230
ENC005673 0.297 D0P1FO 0.227
ENC005674 0.297 D05AFR 0.217
ENC002544 0.295 D0AZ8C 0.216
ENC005549 0.294 D0I9HF 0.212
ENC005722 0.294 D0H1AR 0.212
*Note: the compound similarity was calculated by RDKIT.