NPs Basic Information

Name
Penicixanthene B
Molecular Formula C20H22O5
IUPAC Name*
1-[(9R)-3,8-dihydroxy-9-[(2R)-2-hydroxypropyl]-9H-xanthen-4-yl]butan-1-one
SMILES
CCCC(=O)C1=C(C=CC2=C1OC3=CC=CC(=C3[C@@H]2C[C@@H](C)O)O)O
InChI
InChI=1S/C20H22O5/c1-3-5-14(22)19-16(24)9-8-12-13(10-11(2)21)18-15(23)6-4-7-17(18)25-20(12)19/h4,6-9,11,13,21,23-24H,3,5,10H2,1-2H3/t11-,13-/m1/s1
InChIKey
KEYSMLGWCOGLMJ-DGCLKSJQSA-N
Synonyms
Penicixanthene B
CAS NA
PubChem CID 146683107
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Xanthenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 342.4 ALogp: 3.7
HBD: 3 HBA: 5
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 87.0 Aromatic Rings: 3
Heavy Atoms: 25 QED Weighted: 0.686

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.939 MDCK Permeability: 0.00001960
Pgp-inhibitor: 0.014 Pgp-substrate: 0.302
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.01
30% Bioavailability (F30%): 0.065

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.101 Plasma Protein Binding (PPB): 98.01%
Volume Distribution (VD): 0.452 Fu: 2.63%

ADMET: Metabolism

CYP1A2-inhibitor: 0.888 CYP1A2-substrate: 0.813
CYP2C19-inhibitor: 0.926 CYP2C19-substrate: 0.559
CYP2C9-inhibitor: 0.915 CYP2C9-substrate: 0.977
CYP2D6-inhibitor: 0.713 CYP2D6-substrate: 0.551
CYP3A4-inhibitor: 0.325 CYP3A4-substrate: 0.73

ADMET: Excretion

Clearance (CL): 1.782 Half-life (T1/2): 0.515

ADMET: Toxicity

hERG Blockers: 0.021 Human Hepatotoxicity (H-HT): 0.036
Drug-inuced Liver Injury (DILI): 0.569 AMES Toxicity: 0.376
Rat Oral Acute Toxicity: 0.947 Maximum Recommended Daily Dose: 0.982
Skin Sensitization: 0.397 Carcinogencity: 0.275
Eye Corrosion: 0.003 Eye Irritation: 0.861
Respiratory Toxicity: 0.762
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D0U3YB 0.290
D02FCQ 0.290
D0H6QU 0.273
D0J7RK 0.272
D0A8XN 0.271
D0JY5S 0.261
D0Z1WA 0.260
D03DJL 0.258
D0I8FI 0.253
D08HUC 0.253
*Note: the compound similarity was calculated by RDKIT.