NPs Basic Information

Name
5R-hydroxyrecifeiolide
Molecular Formula C12H20O3
IUPAC Name*
(6R,9E,12R)-6-hydroxy-12-methyl-1-oxacyclododec-9-en-2-one
SMILES
C[C@@H]1C/C=C/CC[C@@H](CCCC(=O)O1)O
InChI
InChI=1S/C12H20O3/c1-10-6-3-2-4-7-11(13)8-5-9-12(14)15-10/h2-3,10-11,13H,4-9H2,1H3/b3-2+/t10-,11+/m1/s1
InChIKey
PFYIIATUFRENPK-NTYHVHHESA-N
Synonyms
5R-hydroxyrecifeiolide
CAS NA
PubChem CID 146682963
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Macrolides and analogues
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Macrolides and analogues

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 212.28 ALogp: 2.1
HBD: 1 HBA: 3
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 1
Heavy Atoms: 15 QED Weighted: 0.496

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.555 MDCK Permeability: 0.00019712
Pgp-inhibitor: 0.489 Pgp-substrate: 0.064
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.019
30% Bioavailability (F30%): 0.901

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.965 Plasma Protein Binding (PPB): 65.46%
Volume Distribution (VD): 1.915 Fu: 30.57%

ADMET: Metabolism

CYP1A2-inhibitor: 0.354 CYP1A2-substrate: 0.227
CYP2C19-inhibitor: 0.107 CYP2C19-substrate: 0.12
CYP2C9-inhibitor: 0.064 CYP2C9-substrate: 0.906
CYP2D6-inhibitor: 0.047 CYP2D6-substrate: 0.249
CYP3A4-inhibitor: 0.12 CYP3A4-substrate: 0.153

ADMET: Excretion

Clearance (CL): 6.376 Half-life (T1/2): 0.9

ADMET: Toxicity

hERG Blockers: 0.013 Human Hepatotoxicity (H-HT): 0.672
Drug-inuced Liver Injury (DILI): 0.055 AMES Toxicity: 0.01
Rat Oral Acute Toxicity: 0.014 Maximum Recommended Daily Dose: 0.959
Skin Sensitization: 0.958 Carcinogencity: 0.77
Eye Corrosion: 0.851 Eye Irritation: 0.823
Respiratory Toxicity: 0.11
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D0K0EK 0.247
D07GRH 0.235
D0C7JF 0.224
D00YWP 0.222
D00ZFP 0.222
D06XMU 0.217
D04JHN 0.214
D04SFH 0.209
D03YVO 0.208
D08QMX 0.207
*Note: the compound similarity was calculated by RDKIT.