NPs Basic Information

Name
Trichocadinin C
Molecular Formula C15H16O4
IUPAC Name*
(7R)-7-[(2S)-1-hydroxypropan-2-yl]-2-oxatricyclo[6.3.1.04,12]dodeca-1(11),3,8(12),9-tetraene-10-carboxylic acid
SMILES
C[C@H](CO)[C@H]1CCC2=COC3=CC(=CC1=C23)C(=O)O
InChI
InChI=1S/C15H16O4/c1-8(6-16)11-3-2-9-7-19-13-5-10(15(17)18)4-12(11)14(9)13/h4-5,7-8,11,16H,2-3,6H2,1H3,(H,17,18)/t8-,11-/m1/s1
InChIKey
NJYGTKDUQVRJAI-LDYMZIIASA-N
Synonyms
Trichocadinin C; CHEMBL4468541
CAS NA
PubChem CID 145721098
ChEMBL ID CHEMBL4468541
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Naphthalenes
        • Subclass: Naphthalenecarboxylic aci
          • Direct Parent: Naphthalenecarboxylic aci

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 260.28 ALogp: 2.6
HBD: 2 HBA: 4
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 70.7 Aromatic Rings: 3
Heavy Atoms: 19 QED Weighted: 0.884

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.824 MDCK Permeability: 0.00000472
Pgp-inhibitor: 0.003 Pgp-substrate: 0.663
Human Intestinal Absorption (HIA): 0.013 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.085

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.168 Plasma Protein Binding (PPB): 93.76%
Volume Distribution (VD): 0.377 Fu: 6.17%

ADMET: Metabolism

CYP1A2-inhibitor: 0.073 CYP1A2-substrate: 0.487
CYP2C19-inhibitor: 0.024 CYP2C19-substrate: 0.053
CYP2C9-inhibitor: 0.16 CYP2C9-substrate: 0.087
CYP2D6-inhibitor: 0.022 CYP2D6-substrate: 0.131
CYP3A4-inhibitor: 0.041 CYP3A4-substrate: 0.099

ADMET: Excretion

Clearance (CL): 2.515 Half-life (T1/2): 0.895

ADMET: Toxicity

hERG Blockers: 0.036 Human Hepatotoxicity (H-HT): 0.532
Drug-inuced Liver Injury (DILI): 0.965 AMES Toxicity: 0.009
Rat Oral Acute Toxicity: 0.596 Maximum Recommended Daily Dose: 0.323
Skin Sensitization: 0.251 Carcinogencity: 0.885
Eye Corrosion: 0.004 Eye Irritation: 0.436
Respiratory Toxicity: 0.186
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004005 0.776 D0P4MT 0.256
ENC004006 0.365 D01CKY 0.245
ENC002334 0.311 D03MGL 0.235
ENC004190 0.300 D0C1IW 0.235
ENC004191 0.300 D0G5UB 0.228
ENC005109 0.299 D0YH0N 0.225
ENC005712 0.297 D06FPQ 0.224
ENC005512 0.289 D07UXP 0.218
ENC004186 0.286 D05AHE 0.216
ENC003405 0.286 D0U0KW 0.213
*Note: the compound similarity was calculated by RDKIT.