NPs Basic Information

Name
Phomopyrone A
Molecular Formula C11H14O4
IUPAC Name*
6-[(E)-but-2-en-2-yl]-3-(hydroxymethyl)-4-methoxypyran-2-one
SMILES
C/C=C(\C)/C1=CC(=C(C(=O)O1)CO)OC
InChI
InChI=1S/C11H14O4/c1-4-7(2)9-5-10(14-3)8(6-12)11(13)15-9/h4-5,12H,6H2,1-3H3/b7-4+
InChIKey
WLPQYAGDMJKPTN-QPJJXVBHSA-N
Synonyms
Phomopyrone A
CAS NA
PubChem CID 139591591
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 210.23 ALogp: 1.8
HBD: 1 HBA: 4
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 55.8 Aromatic Rings: 1
Heavy Atoms: 15 QED Weighted: 0.83

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.707 MDCK Permeability: 0.00002520
Pgp-inhibitor: 0.004 Pgp-substrate: 0.045
Human Intestinal Absorption (HIA): 0.014 20% Bioavailability (F20%): 0.009
30% Bioavailability (F30%): 0.89

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.538 Plasma Protein Binding (PPB): 75.11%
Volume Distribution (VD): 0.898 Fu: 42.61%

ADMET: Metabolism

CYP1A2-inhibitor: 0.925 CYP1A2-substrate: 0.94
CYP2C19-inhibitor: 0.23 CYP2C19-substrate: 0.67
CYP2C9-inhibitor: 0.089 CYP2C9-substrate: 0.738
CYP2D6-inhibitor: 0.029 CYP2D6-substrate: 0.803
CYP3A4-inhibitor: 0.023 CYP3A4-substrate: 0.264

ADMET: Excretion

Clearance (CL): 6.312 Half-life (T1/2): 0.906

ADMET: Toxicity

hERG Blockers: 0.004 Human Hepatotoxicity (H-HT): 0.3
Drug-inuced Liver Injury (DILI): 0.567 AMES Toxicity: 0.022
Rat Oral Acute Toxicity: 0.066 Maximum Recommended Daily Dose: 0.029
Skin Sensitization: 0.237 Carcinogencity: 0.204
Eye Corrosion: 0.012 Eye Irritation: 0.688
Respiratory Toxicity: 0.076
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001650 0.674 D0E9CD 0.250
ENC003737 0.632 D06REO 0.238
ENC003510 0.600 D05QDC 0.224
ENC003261 0.519 D08VYV 0.221
ENC002477 0.519 D02XJY 0.219
ENC003181 0.518 D03LGG 0.217
ENC004632 0.517 D0U5CE 0.217
ENC004631 0.517 D09GYT 0.212
ENC004630 0.517 D06GCK 0.211
ENC003751 0.500 D0B1IP 0.209
*Note: the compound similarity was calculated by RDKIT.