NPs Basic Information

Name
Phomopsichin C
Molecular Formula C16H16O7
IUPAC Name*
methyl (3R)-6-hydroxy-7-methoxy-3-methyl-10-oxo-3,4-dihydro-1H-pyrano[4,3-b]chromene-9-carboxylate
SMILES
C[C@@H]1CC2=C(CO1)C(=O)C3=C(O2)C(=C(C=C3C(=O)OC)OC)O
InChI
InChI=1S/C16H16O7/c1-7-4-10-9(6-22-7)13(17)12-8(16(19)21-3)5-11(20-2)14(18)15(12)23-10/h5,7,18H,4,6H2,1-3H3/t7-/m1/s1
InChIKey
IDMHVJFKTOQOTJ-SSDOTTSWSA-N
Synonyms
Phomopsichin C
CAS NA
PubChem CID 139590406
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Benzene and substituted d
        • Subclass: Benzoic acids and derivat
          • Direct Parent: Gallic acid and derivativ

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 320.29 ALogp: 1.2
HBD: 1 HBA: 7
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 91.3 Aromatic Rings: 3
Heavy Atoms: 23 QED Weighted: 0.849

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.762 MDCK Permeability: 0.00002720
Pgp-inhibitor: 0.093 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.01 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.034

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.16 Plasma Protein Binding (PPB): 77.15%
Volume Distribution (VD): 0.996 Fu: 15.09%

ADMET: Metabolism

CYP1A2-inhibitor: 0.733 CYP1A2-substrate: 0.978
CYP2C19-inhibitor: 0.188 CYP2C19-substrate: 0.644
CYP2C9-inhibitor: 0.577 CYP2C9-substrate: 0.545
CYP2D6-inhibitor: 0.026 CYP2D6-substrate: 0.268
CYP3A4-inhibitor: 0.234 CYP3A4-substrate: 0.18

ADMET: Excretion

Clearance (CL): 3.971 Half-life (T1/2): 0.787

ADMET: Toxicity

hERG Blockers: 0.002 Human Hepatotoxicity (H-HT): 0.964
Drug-inuced Liver Injury (DILI): 0.98 AMES Toxicity: 0.501
Rat Oral Acute Toxicity: 0.5 Maximum Recommended Daily Dose: 0.223
Skin Sensitization: 0.515 Carcinogencity: 0.493
Eye Corrosion: 0.004 Eye Irritation: 0.036
Respiratory Toxicity: 0.341
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004953 0.707 D0C1SF 0.280
ENC003858 0.679 D0G4KG 0.275
ENC004952 0.602 D06GCK 0.269
ENC004951 0.550 D0F7CS 0.261
ENC004950 0.550 D09DHY 0.243
ENC004956 0.537 D07MGA 0.240
ENC003857 0.482 D01XWG 0.239
ENC002197 0.455 D0J4IX 0.238
ENC006066 0.447 D03CQE 0.234
ENC003814 0.422 D0D4HN 0.233
*Note: the compound similarity was calculated by RDKIT.