NPs Basic Information

Name
Chrysogenolide D
Molecular Formula C24H26O8
IUPAC Name*
(1R,2R,10S,13R,15R,18R,19R,21S)-19-hydroxy-7,7,13,18,21-pentamethylspiro[6,11,14,16-tetraoxahexacyclo[16.3.1.03,8.010,21.012,20.015,19]docosa-3,8,12(20)-triene-2,2'-oxirane]-5,17-dione
SMILES
C[C@@H]1C2=C3[C@@]4([C@@H](C[C@@]5([C@]3([C@H](O1)OC5=O)O)C)[C@]6(CO6)C7=CC(=O)OC(C7=C[C@@H]4O2)(C)C)C
InChI
InChI=1S/C24H26O8/c1-10-16-17-22(5)13(8-21(4)18(26)31-19(29-10)24(17,21)27)23(9-28-23)12-7-15(25)32-20(2,3)11(12)6-14(22)30-16/h6-7,10,13-14,19,27H,8-9H2,1-5H3/t10-,13-,14+,19-,21+,22-,23+,24+/m1/s1
InChIKey
ZNOSJWPDZUFPQD-WBTZUOPNSA-N
Synonyms
Chrysogenolide D; CHEMBL4166961
CAS NA
PubChem CID 139589817
ChEMBL ID CHEMBL4166961
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Furopyrans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Furopyrans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 442.5 ALogp: -0.6
HBD: 1 HBA: 8
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 104.0 Aromatic Rings: 7
Heavy Atoms: 32 QED Weighted: 0.45

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.278 MDCK Permeability: 0.00000948
Pgp-inhibitor: 0.998 Pgp-substrate: 0.017
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.982
30% Bioavailability (F30%): 0.113

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.908 Plasma Protein Binding (PPB): 84.02%
Volume Distribution (VD): 2.343 Fu: 16.54%

ADMET: Metabolism

CYP1A2-inhibitor: 0.04 CYP1A2-substrate: 0.862
CYP2C19-inhibitor: 0.524 CYP2C19-substrate: 0.683
CYP2C9-inhibitor: 0.414 CYP2C9-substrate: 0.007
CYP2D6-inhibitor: 0.009 CYP2D6-substrate: 0.057
CYP3A4-inhibitor: 0.62 CYP3A4-substrate: 0.869

ADMET: Excretion

Clearance (CL): 2.065 Half-life (T1/2): 0.695

ADMET: Toxicity

hERG Blockers: 0.099 Human Hepatotoxicity (H-HT): 0.954
Drug-inuced Liver Injury (DILI): 0.306 AMES Toxicity: 0.968
Rat Oral Acute Toxicity: 0.949 Maximum Recommended Daily Dose: 0.824
Skin Sensitization: 0.518 Carcinogencity: 0.645
Eye Corrosion: 0.003 Eye Irritation: 0.01
Respiratory Toxicity: 0.59
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005627 0.624 D0KR9U 0.223
ENC003927 0.532 D06IIB 0.221
ENC002931 0.531 D0G6AB 0.221
ENC005628 0.434 D02QJH 0.218
ENC004709 0.352 D02JNM 0.216
ENC003925 0.321 D06AEO 0.215
ENC002987 0.318 D03ZZK 0.215
ENC002851 0.315 D0P0HT 0.214
ENC005189 0.310 D0D2TN 0.212
ENC005317 0.310 D04GJN 0.211
*Note: the compound similarity was calculated by RDKIT.