NPs Basic Information

Name
Modiolide F
Molecular Formula C12H16O5
IUPAC Name*
[(2S,4R,5E,7R,8Z)-4-hydroxy-2-methyl-10-oxo-2,3,4,7-tetrahydrooxecin-7-yl] acetate
SMILES
C[C@H]1C[C@H](/C=C/[C@H](/C=C\C(=O)O1)OC(=O)C)O
InChI
InChI=1S/C12H16O5/c1-8-7-10(14)3-4-11(17-9(2)13)5-6-12(15)16-8/h3-6,8,10-11,14H,7H2,1-2H3/b4-3+,6-5-/t8-,10-,11+/m0/s1
InChIKey
IGZKYXHLVMUBGS-MDKSHSSESA-N
Synonyms
Modiolide F
CAS NA
PubChem CID 139589568
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Oxocins
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Oxocins

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 240.25 ALogp: 0.9
HBD: 1 HBA: 5
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 72.8 Aromatic Rings: 1
Heavy Atoms: 17 QED Weighted: 0.549

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.58 MDCK Permeability: 0.00004770
Pgp-inhibitor: 0.01 Pgp-substrate: 0.054
Human Intestinal Absorption (HIA): 0.012 20% Bioavailability (F20%): 0.988
30% Bioavailability (F30%): 0.992

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.979 Plasma Protein Binding (PPB): 15.77%
Volume Distribution (VD): 0.482 Fu: 75.94%

ADMET: Metabolism

CYP1A2-inhibitor: 0.028 CYP1A2-substrate: 0.04
CYP2C19-inhibitor: 0.026 CYP2C19-substrate: 0.139
CYP2C9-inhibitor: 0.013 CYP2C9-substrate: 0.287
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.11
CYP3A4-inhibitor: 0.113 CYP3A4-substrate: 0.276

ADMET: Excretion

Clearance (CL): 5.105 Half-life (T1/2): 0.902

ADMET: Toxicity

hERG Blockers: 0.014 Human Hepatotoxicity (H-HT): 0.962
Drug-inuced Liver Injury (DILI): 0.036 AMES Toxicity: 0.084
Rat Oral Acute Toxicity: 0.224 Maximum Recommended Daily Dose: 0.984
Skin Sensitization: 0.976 Carcinogencity: 0.544
Eye Corrosion: 0.973 Eye Irritation: 0.957
Respiratory Toxicity: 0.613
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D06WTZ 0.248
D0T6WT 0.245
D0H0ND 0.243
D02RQU 0.221
D0R9VR 0.218
D09WYX 0.218
D05VQI 0.217
D0P0HT 0.216
D02FEM 0.214
D0GY5Z 0.209
*Note: the compound similarity was calculated by RDKIT.