NPs Basic Information

Name
Xylapyrone D
Molecular Formula C11H16O5
IUPAC Name*
6-(1,5-dihydroxypentyl)-4-methoxypyran-2-one
SMILES
COC1=CC(=O)OC(=C1)C(CCCCO)O
InChI
InChI=1S/C11H16O5/c1-15-8-6-10(16-11(14)7-8)9(13)4-2-3-5-12/h6-7,9,12-13H,2-5H2,1H3
InChIKey
BLPGDHPHQAVVJJ-UHFFFAOYSA-N
Synonyms
Xylapyrone D
CAS NA
PubChem CID 139586422
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty alcohols
          • Direct Parent: Fatty alcohols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 228.24 ALogp: 0.0
HBD: 2 HBA: 5
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 76.0 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.716

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.885 MDCK Permeability: 0.00008450
Pgp-inhibitor: 0.197 Pgp-substrate: 0.604
Human Intestinal Absorption (HIA): 0.526 20% Bioavailability (F20%): 0.946
30% Bioavailability (F30%): 0.998

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.357 Plasma Protein Binding (PPB): 37.71%
Volume Distribution (VD): 0.763 Fu: 54.52%

ADMET: Metabolism

CYP1A2-inhibitor: 0.079 CYP1A2-substrate: 0.909
CYP2C19-inhibitor: 0.029 CYP2C19-substrate: 0.142
CYP2C9-inhibitor: 0.011 CYP2C9-substrate: 0.7
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.645
CYP3A4-inhibitor: 0.011 CYP3A4-substrate: 0.209

ADMET: Excretion

Clearance (CL): 9.196 Half-life (T1/2): 0.832

ADMET: Toxicity

hERG Blockers: 0.051 Human Hepatotoxicity (H-HT): 0.344
Drug-inuced Liver Injury (DILI): 0.193 AMES Toxicity: 0.017
Rat Oral Acute Toxicity: 0.061 Maximum Recommended Daily Dose: 0.223
Skin Sensitization: 0.407 Carcinogencity: 0.043
Eye Corrosion: 0.101 Eye Irritation: 0.81
Respiratory Toxicity: 0.033
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006023 0.889 D02XJY 0.257
ENC006022 0.783 D0T1LK 0.256
ENC005564 0.735 D04UTT 0.232
ENC005860 0.582 D0MM8N 0.222
ENC005859 0.554 D03LGG 0.221
ENC002737 0.500 D0U5CE 0.221
ENC002549 0.477 D09GYT 0.217
ENC005908 0.474 D0DJ1B 0.213
ENC005618 0.462 D04KJO 0.213
ENC003311 0.455 D0Q1IT 0.213
*Note: the compound similarity was calculated by RDKIT.