NPs Basic Information

Name
Chermesin A
Molecular Formula C24H36O3
IUPAC Name*
(3S,3'aR,4aS,7S,8S,8aS)-3-hydroxy-3'a,4,4,4',7,7',8a-heptamethylspiro[2,3,4a,5,6,7-hexahydro-1H-naphthalene-8,2'-3H-1-benzofuran]-6'-one
SMILES
C[C@H]1CC[C@@H]2[C@@]([C@]13C[C@@]4(C(=CC(=O)C(=C4O3)C)C)C)(CC[C@@H](C2(C)C)O)C
InChI
InChI=1S/C24H36O3/c1-14-8-9-18-21(4,5)19(26)10-11-23(18,7)24(14)13-22(6)15(2)12-17(25)16(3)20(22)27-24/h12,14,18-19,26H,8-11,13H2,1-7H3/t14-,18-,19-,22+,23-,24-/m0/s1
InChIKey
QSKNABACZZQUJZ-HIRZNULXSA-N
Synonyms
Chermesin A; CHEMBL4542095
CAS NA
PubChem CID 139048358
ChEMBL ID CHEMBL4542095
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzofurans
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Benzofurans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 372.5 ALogp: 4.9
HBD: 1 HBA: 3
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 4
Heavy Atoms: 27 QED Weighted: 0.612

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.848 MDCK Permeability: 0.00001780
Pgp-inhibitor: 0.996 Pgp-substrate: 0.024
Human Intestinal Absorption (HIA): 0.009 20% Bioavailability (F20%): 0.982
30% Bioavailability (F30%): 0.943

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.469 Plasma Protein Binding (PPB): 89.62%
Volume Distribution (VD): 1.854 Fu: 9.17%

ADMET: Metabolism

CYP1A2-inhibitor: 0.063 CYP1A2-substrate: 0.704
CYP2C19-inhibitor: 0.421 CYP2C19-substrate: 0.893
CYP2C9-inhibitor: 0.514 CYP2C9-substrate: 0.06
CYP2D6-inhibitor: 0.604 CYP2D6-substrate: 0.067
CYP3A4-inhibitor: 0.941 CYP3A4-substrate: 0.709

ADMET: Excretion

Clearance (CL): 13.912 Half-life (T1/2): 0.13

ADMET: Toxicity

hERG Blockers: 0.068 Human Hepatotoxicity (H-HT): 0.573
Drug-inuced Liver Injury (DILI): 0.043 AMES Toxicity: 0.006
Rat Oral Acute Toxicity: 0.888 Maximum Recommended Daily Dose: 0.932
Skin Sensitization: 0.564 Carcinogencity: 0.923
Eye Corrosion: 0.219 Eye Irritation: 0.042
Respiratory Toxicity: 0.945
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003565 0.735 D0L2LS 0.292
ENC005403 0.541 D0Z1XD 0.291
ENC003020 0.490 D04GJN 0.284
ENC002996 0.490 D0I2SD 0.273
ENC003789 0.490 D06IIB 0.268
ENC002995 0.490 D0W2EK 0.267
ENC005396 0.490 D0U3GL 0.267
ENC002673 0.490 D0P0HT 0.263
ENC003552 0.480 D0D2TN 0.261
ENC003564 0.458 D06XMU 0.260
*Note: the compound similarity was calculated by RDKIT.