NPs Basic Information

Name
Rhizopycnin C
Molecular Formula C15H11ClO7
IUPAC Name*
(1R)-2-chloro-1,3,7-trihydroxy-9-methoxy-1-methylbenzo[c]chromene-4,6-dione
SMILES
C[C@]1(C2=C(C(=O)C(=C1Cl)O)OC(=O)C3=C2C=C(C=C3O)OC)O
InChI
InChI=1S/C15H11ClO7/c1-15(21)9-6-3-5(22-2)4-7(17)8(6)14(20)23-12(9)10(18)11(19)13(15)16/h3-4,17,19,21H,1-2H3/t15-/m1/s1
InChIKey
ATVFPTGTIZZMLF-OAHLLOKOSA-N
Synonyms
Rhizopycnin C; CHEMBL3926145
CAS NA
PubChem CID 134141491
ChEMBL ID CHEMBL3926145
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Isocoumarins and derivati
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Isocoumarins and derivati

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 338.69 ALogp: 1.4
HBD: 3 HBA: 7
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 113.0 Aromatic Rings: 3
Heavy Atoms: 23 QED Weighted: 0.731

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.885 MDCK Permeability: 0.00002370
Pgp-inhibitor: 0.832 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.08 20% Bioavailability (F20%): 0.011
30% Bioavailability (F30%): 0.611

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.056 Plasma Protein Binding (PPB): 88.69%
Volume Distribution (VD): 0.726 Fu: 9.35%

ADMET: Metabolism

CYP1A2-inhibitor: 0.973 CYP1A2-substrate: 0.953
CYP2C19-inhibitor: 0.077 CYP2C19-substrate: 0.126
CYP2C9-inhibitor: 0.253 CYP2C9-substrate: 0.808
CYP2D6-inhibitor: 0.093 CYP2D6-substrate: 0.255
CYP3A4-inhibitor: 0.114 CYP3A4-substrate: 0.112

ADMET: Excretion

Clearance (CL): 1.163 Half-life (T1/2): 0.688

ADMET: Toxicity

hERG Blockers: 0.015 Human Hepatotoxicity (H-HT): 0.346
Drug-inuced Liver Injury (DILI): 0.952 AMES Toxicity: 0.315
Rat Oral Acute Toxicity: 0.121 Maximum Recommended Daily Dose: 0.274
Skin Sensitization: 0.579 Carcinogencity: 0.034
Eye Corrosion: 0.036 Eye Irritation: 0.5
Respiratory Toxicity: 0.184
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002502 0.786 D0K8KX 0.287
ENC003470 0.689 D06GCK 0.287
ENC002938 0.643 D0R6RC 0.267
ENC003115 0.640 D04AIT 0.266
ENC003829 0.623 D07MGA 0.258
ENC002692 0.532 D02GAC 0.254
ENC002633 0.527 D0R9WP 0.250
ENC005094 0.519 D07JHH 0.246
ENC002516 0.513 D0G4KG 0.239
ENC003472 0.500 D0C1SF 0.235
*Note: the compound similarity was calculated by RDKIT.