NPs Basic Information

Name
Diepoxin delta
Molecular Formula C20H16O8
IUPAC Name*
(1'S,2'S,3'R,5'R,7'R,10'R,11'S)-2',10',11'-trihydroxyspiro[2,4-dioxatricyclo[7.3.1.05,13]trideca-1(12),5,7,9(13),10-pentaene-3,6'-4,12-dioxatetracyclo[5.4.1.01,7.03,5]dodecane]-8'-one
SMILES
C1[C@H]([C@@H]([C@]23[C@H]([C@@H]4[C@@H](O4)C5([C@@]2(C1=O)O3)OC6=CC=CC7=C6C(=CC=C7)O5)O)O)O
InChI
InChI=1S/C20H16O8/c21-9-7-12(22)19-18(28-19,15(9)23)16(24)14-17(25-14)20(19)26-10-5-1-3-8-4-2-6-11(27-20)13(8)10/h1-6,9,14-17,21,23-24H,7H2/t9-,14-,15+,16+,17-,18+,19+/m1/s1
InChIKey
AEHDWPXNIOFWQB-XIZHOQIMSA-N
Synonyms
Diepoxin delta; CHEMBL3342627
CAS NA
PubChem CID 102223270
ChEMBL ID CHEMBL3342627
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Naphthalenes
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Naphthalenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 384.3 ALogp: -0.5
HBD: 3 HBA: 8
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 121.0 Aromatic Rings: 7
Heavy Atoms: 28 QED Weighted: 0.546

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.79 MDCK Permeability: 0.00003330
Pgp-inhibitor: 0.005 Pgp-substrate: 0.994
Human Intestinal Absorption (HIA): 0.143 20% Bioavailability (F20%): 0.091
30% Bioavailability (F30%): 0.949

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.67 Plasma Protein Binding (PPB): 87.99%
Volume Distribution (VD): 0.48 Fu: 3.88%

ADMET: Metabolism

CYP1A2-inhibitor: 0.077 CYP1A2-substrate: 0.481
CYP2C19-inhibitor: 0.032 CYP2C19-substrate: 0.554
CYP2C9-inhibitor: 0.023 CYP2C9-substrate: 0.045
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.175
CYP3A4-inhibitor: 0.031 CYP3A4-substrate: 0.429

ADMET: Excretion

Clearance (CL): 9.485 Half-life (T1/2): 0.655

ADMET: Toxicity

hERG Blockers: 0.021 Human Hepatotoxicity (H-HT): 0.994
Drug-inuced Liver Injury (DILI): 0.98 AMES Toxicity: 0.949
Rat Oral Acute Toxicity: 0.742 Maximum Recommended Daily Dose: 0.057
Skin Sensitization: 0.891 Carcinogencity: 0.827
Eye Corrosion: 0.003 Eye Irritation: 0.023
Respiratory Toxicity: 0.945
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002330 1.000 D0Q3VE 0.242
ENC003238 0.831 D08CCE 0.228
ENC001999 0.717 D06ALD 0.217
ENC001988 0.681 D06TJJ 0.216
ENC002185 0.663 D01TNW 0.215
ENC003195 0.656 D00JRA 0.211
ENC003194 0.606 D06BQU 0.205
ENC003198 0.580 D0AZ8C 0.203
ENC003197 0.559 D08DFX 0.201
ENC003196 0.544 D05MQK 0.197
*Note: the compound similarity was calculated by RDKIT.