NPs Basic Information

Name
Columellarin
Molecular Formula C15H20O2
IUPAC Name*
(3aS,8R,8aS,9aR)-5,8-dimethyl-1-methylidene-3a,4,6,7,8,8a,9,9a-octahydroazuleno[6,5-b]furan-2-one
SMILES
C[C@@H]1CCC2=C(C[C@H]3[C@H](C[C@@H]12)C(=C)C(=O)O3)C
InChI
InChI=1S/C15H20O2/c1-8-4-5-11-9(2)6-14-13(7-12(8)11)10(3)15(16)17-14/h8,12-14H,3-7H2,1-2H3/t8-,12+,13-,14+/m1/s1
InChIKey
GAPVTYWDGWKUKK-XAGKMFGPSA-N
Synonyms
Columellarin; 66873-37-8
CAS NA
PubChem CID 101316902
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Lactones
        • Subclass: Gamma butyrolactones
          • Direct Parent: Gamma butyrolactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 232.32 ALogp: 2.7
HBD: 0 HBA: 2
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 26.3 Aromatic Rings: 3
Heavy Atoms: 17 QED Weighted: 0.358

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.632 MDCK Permeability: 0.00003060
Pgp-inhibitor: 0.016 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.032 20% Bioavailability (F20%): 0.017
30% Bioavailability (F30%): 0.036

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.036 Plasma Protein Binding (PPB): 94.84%
Volume Distribution (VD): 3.566 Fu: 3.13%

ADMET: Metabolism

CYP1A2-inhibitor: 0.244 CYP1A2-substrate: 0.1
CYP2C19-inhibitor: 0.276 CYP2C19-substrate: 0.718
CYP2C9-inhibitor: 0.406 CYP2C9-substrate: 0.165
CYP2D6-inhibitor: 0.021 CYP2D6-substrate: 0.318
CYP3A4-inhibitor: 0.451 CYP3A4-substrate: 0.349

ADMET: Excretion

Clearance (CL): 13.716 Half-life (T1/2): 0.155

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.142
Drug-inuced Liver Injury (DILI): 0.807 AMES Toxicity: 0.082
Rat Oral Acute Toxicity: 0.378 Maximum Recommended Daily Dose: 0.409
Skin Sensitization: 0.833 Carcinogencity: 0.716
Eye Corrosion: 0.732 Eye Irritation: 0.91
Respiratory Toxicity: 0.936
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003248 0.593 D0A2AJ 0.329
ENC000808 0.419 D0W3OS 0.247
ENC002374 0.397 D0K7LU 0.231
ENC000707 0.382 D0D2VS 0.227
ENC001408 0.343 D04VIS 0.223
ENC004578 0.324 D0X5KF 0.222
ENC004579 0.324 D04JHN 0.216
ENC004574 0.324 D0S3WH 0.212
ENC004575 0.324 D0G6AB 0.211
ENC004576 0.324 D02KIU 0.200
*Note: the compound similarity was calculated by RDKIT.