NPs Basic Information

Name
(-)-Sambutoxin
Molecular Formula C28H39NO4
IUPAC Name*
3-[6-(4,6-dimethyloct-2-en-2-yl)-5-methyloxan-2-yl]-4-hydroxy-5-(4-hydroxyphenyl)-1-methylpyridin-2-one
SMILES
CCC(C)CC(C)C=C(C)C1C(CCC(O1)C2=C(C(=CN(C2=O)C)C3=CC=C(C=C3)O)O)C
InChI
InChI=1S/C28H39NO4/c1-7-17(2)14-18(3)15-20(5)27-19(4)8-13-24(33-27)25-26(31)23(16-29(6)28(25)32)21-9-11-22(30)12-10-21/h9-12,15-19,24,27,30-31H,7-8,13-14H2,1-6H3
InChIKey
FVYDVAOTXPELMH-UHFFFAOYSA-N
Synonyms
Sambutoxin; (-)-sambutoxin; 160047-56-3; B0005-168457
CAS NA
PubChem CID 76181157
ChEMBL ID CHEMBL480870
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Terpene glycosides
          • Direct Parent: Terpene glycosides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 453.6 ALogp: 5.7
HBD: 2 HBA: 4
Rotatable Bonds: 7 Lipinski's rule of five: Rejected
Polar Surface Area: 70.0 Aromatic Rings: 3
Heavy Atoms: 33 QED Weighted: 0.481

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.638 MDCK Permeability: 0.00001430
Pgp-inhibitor: 0.631 Pgp-substrate: 0.029
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.566
30% Bioavailability (F30%): 0.483

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.131 Plasma Protein Binding (PPB): 98.74%
Volume Distribution (VD): 1.219 Fu: 0.84%

ADMET: Metabolism

CYP1A2-inhibitor: 0.155 CYP1A2-substrate: 0.928
CYP2C19-inhibitor: 0.808 CYP2C19-substrate: 0.867
CYP2C9-inhibitor: 0.446 CYP2C9-substrate: 0.965
CYP2D6-inhibitor: 0.047 CYP2D6-substrate: 0.68
CYP3A4-inhibitor: 0.334 CYP3A4-substrate: 0.625

ADMET: Excretion

Clearance (CL): 9.163 Half-life (T1/2): 0.043

ADMET: Toxicity

hERG Blockers: 0.037 Human Hepatotoxicity (H-HT): 0.784
Drug-inuced Liver Injury (DILI): 0.553 AMES Toxicity: 0.132
Rat Oral Acute Toxicity: 0.544 Maximum Recommended Daily Dose: 0.254
Skin Sensitization: 0.19 Carcinogencity: 0.057
Eye Corrosion: 0.003 Eye Irritation: 0.016
Respiratory Toxicity: 0.617
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003476 1.000 D0O6GC 0.244
ENC004958 0.731 D0QC3M 0.244
ENC002822 0.586 D02LTL 0.240
ENC002361 0.538 D08GHB 0.236
ENC005616 0.361 D0Z1WA 0.235
ENC004038 0.327 D0H6QU 0.235
ENC002814 0.326 D03KIA 0.234
ENC003249 0.302 D0I0DL 0.233
ENC004319 0.292 D04XEG 0.228
ENC005323 0.290 D0JE2E 0.228
*Note: the compound similarity was calculated by RDKIT.