NPs Basic Information

Name
Xylarenone E
Molecular Formula C26H40O8
IUPAC Name*
[(1aR,4R,7S,7aR,7bR)-1a-(3-hydroxyprop-1-en-2-yl)-7,7a-dimethyl-2-oxo-5,6,7,7b-tetrahydro-4H-naphtho[1,2-b]oxiren-4-yl] 2,7-dihydroxy-2-(hydroxymethyl)-4,6-dimethyloctanoate
SMILES
C[C@H]1CC[C@H](C2=CC(=O)[C@]3([C@@H]([C@]12C)O3)C(=C)CO)OC(=O)C(CC(C)CC(C)C(C)O)(CO)O
InChI
InChI=1S/C26H40O8/c1-14(9-15(2)18(5)29)11-25(32,13-28)23(31)33-20-8-7-16(3)24(6)19(20)10-21(30)26(17(4)12-27)22(24)34-26/h10,14-16,18,20,22,27-29,32H,4,7-9,11-13H2,1-3,5-6H3/t14?,15?,16-,18?,20+,22+,24+,25?,26-/m0/s1
InChIKey
SYBSGEKEVRNWDG-DBCRVZMNSA-N
Synonyms
Xylarenone E; CHEBI:69734; CHEMBL1813185; Q27138079
CAS NA
PubChem CID 53360339
ChEMBL ID CHEMBL1813185
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 480.6 ALogp: 1.8
HBD: 4 HBA: 8
Rotatable Bonds: 11 Lipinski's rule of five: Accepted
Polar Surface Area: 137.0 Aromatic Rings: 3
Heavy Atoms: 34 QED Weighted: 0.212

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.101 MDCK Permeability: 0.00003160
Pgp-inhibitor: 0.005 Pgp-substrate: 0.617
Human Intestinal Absorption (HIA): 0.104 20% Bioavailability (F20%): 0.009
30% Bioavailability (F30%): 0.009

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.575 Plasma Protein Binding (PPB): 44.22%
Volume Distribution (VD): 0.433 Fu: 57.04%

ADMET: Metabolism

CYP1A2-inhibitor: 0.006 CYP1A2-substrate: 0.111
CYP2C19-inhibitor: 0.011 CYP2C19-substrate: 0.796
CYP2C9-inhibitor: 0.008 CYP2C9-substrate: 0.043
CYP2D6-inhibitor: 0.001 CYP2D6-substrate: 0.045
CYP3A4-inhibitor: 0.367 CYP3A4-substrate: 0.791

ADMET: Excretion

Clearance (CL): 2.684 Half-life (T1/2): 0.935

ADMET: Toxicity

hERG Blockers: 0.003 Human Hepatotoxicity (H-HT): 0.165
Drug-inuced Liver Injury (DILI): 0.842 AMES Toxicity: 0.901
Rat Oral Acute Toxicity: 0.438 Maximum Recommended Daily Dose: 0.361
Skin Sensitization: 0.916 Carcinogencity: 0.269
Eye Corrosion: 0.004 Eye Irritation: 0.031
Respiratory Toxicity: 0.926
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002779 0.835 D03SXE 0.230
ENC002770 0.648 D02RQU 0.221
ENC002482 0.484 D08PIQ 0.216
ENC005060 0.321 D0F7NQ 0.213
ENC002137 0.288 D0IT2G 0.213
ENC003665 0.275 D07DVK 0.213
ENC002888 0.270 D03IKT 0.213
ENC002887 0.270 D0CW1P 0.213
ENC005889 0.252 D0E9KA 0.211
ENC004127 0.248 D0I5DS 0.207
*Note: the compound similarity was calculated by RDKIT.