NPs Basic Information

Name
Silphinene
Molecular Formula C15H24
IUPAC Name*
(1R,5S,8R,11R)-5,7,7,11-tetramethyltricyclo[6.3.0.01,5]undec-2-ene
SMILES
C[C@@H]1CC[C@H]2[C@]13C=CC[C@]3(CC2(C)C)C
InChI
InChI=1S/C15H24/c1-11-6-7-12-13(2,3)10-14(4)8-5-9-15(11,12)14/h5,9,11-12H,6-8,10H2,1-4H3/t11-,12-,14+,15+/m1/s1
InChIKey
VHIAMHVUKUKCHP-UXOAXIEHSA-N
Synonyms
silphinene; CHEMBL458374
CAS NA
PubChem CID 44567200
ChEMBL ID CHEMBL458374
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Angular triquinanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 204.35 ALogp: 5.2
HBD: 0 HBA: 0
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 3
Heavy Atoms: 15 QED Weighted: 0.491

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.649 MDCK Permeability: 0.00002910
Pgp-inhibitor: 0 Pgp-substrate: 0
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.002
30% Bioavailability (F30%): 0.048

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.135 Plasma Protein Binding (PPB): 88.88%
Volume Distribution (VD): 1.001 Fu: 18.89%

ADMET: Metabolism

CYP1A2-inhibitor: 0.462 CYP1A2-substrate: 0.508
CYP2C19-inhibitor: 0.464 CYP2C19-substrate: 0.92
CYP2C9-inhibitor: 0.404 CYP2C9-substrate: 0.769
CYP2D6-inhibitor: 0.09 CYP2D6-substrate: 0.475
CYP3A4-inhibitor: 0.487 CYP3A4-substrate: 0.293

ADMET: Excretion

Clearance (CL): 8.7 Half-life (T1/2): 0.215

ADMET: Toxicity

hERG Blockers: 0.022 Human Hepatotoxicity (H-HT): 0.097
Drug-inuced Liver Injury (DILI): 0.023 AMES Toxicity: 0.003
Rat Oral Acute Toxicity: 0.038 Maximum Recommended Daily Dose: 0.819
Skin Sensitization: 0.925 Carcinogencity: 0.038
Eye Corrosion: 0.959 Eye Irritation: 0.95
Respiratory Toxicity: 0.549
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001831 0.390 D0V8HA 0.281
ENC001893 0.377 D0D2TN 0.239
ENC001172 0.377 D0H1QY 0.228
ENC002989 0.367 D0P0HT 0.215
ENC003215 0.367 D0Z1XD 0.214
ENC003477 0.333 D0I5DS 0.213
ENC003049 0.328 D04GJN 0.211
ENC001810 0.328 D0I2SD 0.211
ENC002267 0.323 D07DVK 0.208
ENC001834 0.323 D0IT2G 0.208
*Note: the compound similarity was calculated by RDKIT.