NPs Basic Information

Name
(3R)-4-methyl-3-(phenylmethyl)-1,3-dihydro-1,4-benzodiazepine-2,5-dione
Molecular Formula C17H16N2O2
IUPAC Name*
(3R)-3-benzyl-4-methyl-1,3-dihydro-1,4-benzodiazepine-2,5-dione
SMILES
CN1[C@@H](C(=O)NC2=CC=CC=C2C1=O)CC3=CC=CC=C3
InChI
InChI=1S/C17H16N2O2/c1-19-15(11-12-7-3-2-4-8-12)16(20)18-14-10-6-5-9-13(14)17(19)21/h2-10,15H,11H2,1H3,(H,18,20)/t15-/m1/s1
InChIKey
KSQNKZMAMGACTL-OAHLLOKOSA-N
Synonyms
cyclopeptine; (3R)-4-methyl-3-(phenylmethyl)-1,3-dihydro-1,4-benzodiazepine-2,5-dione; ZINC13429859; 8R0
CAS NA
PubChem CID 25767730
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzodiazepines
        • Subclass: 1,4-benzodiazepines
          • Direct Parent: 1,4-benzodiazepines

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 280.32 ALogp: 2.4
HBD: 1 HBA: 2
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 49.4 Aromatic Rings: 3
Heavy Atoms: 21 QED Weighted: 0.919

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.55 MDCK Permeability: 0.00005810
Pgp-inhibitor: 0.028 Pgp-substrate: 0.005
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.002

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.815 Plasma Protein Binding (PPB): 87.01%
Volume Distribution (VD): 0.74 Fu: 13.59%

ADMET: Metabolism

CYP1A2-inhibitor: 0.518 CYP1A2-substrate: 0.841
CYP2C19-inhibitor: 0.824 CYP2C19-substrate: 0.769
CYP2C9-inhibitor: 0.588 CYP2C9-substrate: 0.71
CYP2D6-inhibitor: 0.099 CYP2D6-substrate: 0.757
CYP3A4-inhibitor: 0.298 CYP3A4-substrate: 0.468

ADMET: Excretion

Clearance (CL): 1.586 Half-life (T1/2): 0.582

ADMET: Toxicity

hERG Blockers: 0.046 Human Hepatotoxicity (H-HT): 0.562
Drug-inuced Liver Injury (DILI): 0.946 AMES Toxicity: 0.075
Rat Oral Acute Toxicity: 0.541 Maximum Recommended Daily Dose: 0.05
Skin Sensitization: 0.15 Carcinogencity: 0.262
Eye Corrosion: 0.003 Eye Irritation: 0.022
Respiratory Toxicity: 0.052
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004648 0.686 D08FTG 0.473
ENC004892 0.579 D0E4DW 0.402
ENC003110 0.577 D06UDO 0.400
ENC002940 0.554 D09LDR 0.393
ENC003593 0.524 D0G1VX 0.390
ENC004606 0.522 D0B1FE 0.390
ENC004605 0.522 D0P3JU 0.386
ENC004647 0.522 D07VHR 0.385
ENC004646 0.522 D0QL3P 0.373
ENC003272 0.518 D0KS6W 0.369
*Note: the compound similarity was calculated by RDKIT.