NPs Basic Information

Name
(7R,10R,11R,12E,17E,19E,21S)-21-hydroxy-11,19-dimethyl-10-propan-2-yl-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.03,7]octacosa-1(27),12,17,19,25(28)-pentaene-2,8,14,23-tetrone
Molecular Formula C28H37N3O7
IUPAC Name*
(7R,10R,11R,12Z,17Z,19Z,21S)-21-hydroxy-11,19-dimethyl-10-propan-2-yl-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.03,7]octacosa-1(27),12,17,19,25(28)-pentaene-2,8,14,23-tetrone
SMILES
C[C@@H]1/C=C\C(=O)NC/C=C\C(=C/[C@H](CC(=O)CC2=NC(=CO2)C(=O)N3CCC[C@@H]3C(=O)O[C@@H]1C(C)C)O)\C
InChI
InChI=1S/C28H37N3O7/c1-17(2)26-19(4)9-10-24(34)29-11-5-7-18(3)13-20(32)14-21(33)15-25-30-22(16-37-25)27(35)31-12-6-8-23(31)28(36)38-26/h5,7,9-10,13,16-17,19-20,23,26,32H,6,8,11-12,14-15H2,1-4H3,(H,29,34)/b7-5-,10-9-,18-13-/t19-,20-,23-,26-/m1/s1
InChIKey
JOOMGSFOCRDAHL-KJHAIBPLSA-N
Synonyms
(7R,10R,11R,12E,17E,19E,21S)-21-hydroxy-11,19-dimethyl-10-propan-2-yl-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.03,7]octacosa-1(27),12,17,19,25(28)-pentaene-2,8,14,23-tetrone; 21102-49-8; Virginiamycin M2; (7R,10R,11R,12Z,17Z,19Z,21S)-21-Hydroxy-11,19-dimethyl-10-propan-2-yl-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.03,7]octacosa-1(27),12,17,19,25(28)-pentaene-2,8,14,23-tetrone
CAS 21102-49-8
PubChem CID 21944116
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Macrolide lactams
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Macrolide lactams

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 527.6 ALogp: 2.4
HBD: 2 HBA: 8
Rotatable Bonds: 1 Lipinski's rule of five: Rejected
Polar Surface Area: 139.0 Aromatic Rings: 3
Heavy Atoms: 38 QED Weighted: 0.531

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.771 MDCK Permeability: 0.00000934
Pgp-inhibitor: 0.006 Pgp-substrate: 0.586
Human Intestinal Absorption (HIA): 0.526 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.98

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.57 Plasma Protein Binding (PPB): 73.40%
Volume Distribution (VD): 0.823 Fu: 24.04%

ADMET: Metabolism

CYP1A2-inhibitor: 0.017 CYP1A2-substrate: 0.074
CYP2C19-inhibitor: 0.039 CYP2C19-substrate: 0.072
CYP2C9-inhibitor: 0.116 CYP2C9-substrate: 0.015
CYP2D6-inhibitor: 0.004 CYP2D6-substrate: 0.054
CYP3A4-inhibitor: 0.586 CYP3A4-substrate: 0.275

ADMET: Excretion

Clearance (CL): 8.611 Half-life (T1/2): 0.888

ADMET: Toxicity

hERG Blockers: 0.026 Human Hepatotoxicity (H-HT): 0.872
Drug-inuced Liver Injury (DILI): 0.942 AMES Toxicity: 0.008
Rat Oral Acute Toxicity: 0.097 Maximum Recommended Daily Dose: 0.93
Skin Sensitization: 0.376 Carcinogencity: 0.901
Eye Corrosion: 0.003 Eye Irritation: 0.006
Respiratory Toxicity: 0.533
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003558 0.750 D05AFC 0.686
ENC005288 0.641 D05MNW 0.360
ENC005287 0.612 D07XGH 0.360
ENC005087 0.272 D03LJR 0.270
ENC003855 0.256 D0V7WS 0.261
ENC003645 0.254 D0K3QS 0.260
ENC001855 0.253 D08NLN 0.253
ENC005850 0.252 D06YFA 0.251
ENC002483 0.249 D0ES1Q 0.247
ENC002520 0.248 D0Z4UN 0.242
*Note: the compound similarity was calculated by RDKIT.