NPs Basic Information

Name
5-Hydroxymethylmellein
Molecular Formula C11H12O4
IUPAC Name*
(3R)-8-hydroxy-5-(hydroxymethyl)-3-methyl-3,4-dihydroisochromen-1-one
SMILES
C[C@@H]1CC2=C(C=CC(=C2C(=O)O1)O)CO
InChI
InChI=1S/C11H12O4/c1-6-4-8-7(5-12)2-3-9(13)10(8)11(14)15-6/h2-3,6,12-13H,4-5H2,1H3/t6-/m1/s1
InChIKey
OALPOISXSLLKCP-ZCFIWIBFSA-N
Synonyms
5-Hydroxymethylmellein; CHEMBL4463607; BDBM50524010
CAS NA
PubChem CID 14807793
ChEMBL ID CHEMBL4463607
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 2-benzopyrans
          • Direct Parent: 2-benzopyrans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 208.21 ALogp: 1.6
HBD: 2 HBA: 4
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 66.8 Aromatic Rings: 2
Heavy Atoms: 15 QED Weighted: 0.685

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.666 MDCK Permeability: 0.00001060
Pgp-inhibitor: 0.001 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.005 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.668

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.7 Plasma Protein Binding (PPB): 79.95%
Volume Distribution (VD): 0.837 Fu: 21.55%

ADMET: Metabolism

CYP1A2-inhibitor: 0.908 CYP1A2-substrate: 0.196
CYP2C19-inhibitor: 0.117 CYP2C19-substrate: 0.159
CYP2C9-inhibitor: 0.089 CYP2C9-substrate: 0.647
CYP2D6-inhibitor: 0.691 CYP2D6-substrate: 0.487
CYP3A4-inhibitor: 0.212 CYP3A4-substrate: 0.172

ADMET: Excretion

Clearance (CL): 10.621 Half-life (T1/2): 0.861

ADMET: Toxicity

hERG Blockers: 0.012 Human Hepatotoxicity (H-HT): 0.146
Drug-inuced Liver Injury (DILI): 0.586 AMES Toxicity: 0.131
Rat Oral Acute Toxicity: 0.099 Maximum Recommended Daily Dose: 0.188
Skin Sensitization: 0.581 Carcinogencity: 0.891
Eye Corrosion: 0.007 Eye Irritation: 0.784
Respiratory Toxicity: 0.171
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005939 0.717 D07MGA 0.275
ENC002309 0.681 D02NSF 0.272
ENC005940 0.647 D0K5CB 0.265
ENC004808 0.647 D02ZJI 0.265
ENC004364 0.615 D04JHN 0.263
ENC005941 0.582 D0X3FX 0.253
ENC003320 0.547 D03YVO 0.250
ENC000584 0.540 D0PG8O 0.244
ENC000856 0.540 D0YH0N 0.244
ENC002082 0.540 D07AHW 0.241
*Note: the compound similarity was calculated by RDKIT.