NPs Basic Information

Name
Verrucarin J
Molecular Formula C27H32O8
IUPAC Name*
(1R,3R,8R,12E,18E,20Z,24R,25S,26S)-5,13,25-trimethylspiro[2,10,16,23-tetraoxatetracyclo[22.2.1.03,8.08,25]heptacosa-4,12,18,20-tetraene-26,2'-oxirane]-11,17,22-trione
SMILES
CC1=C[C@@H]2[C@@]3(CC1)COC(=O)/C=C(/CCOC(=O)/C=C/C=C\C(=O)O[C@H]4[C@]3([C@]5(CO5)[C@@H](C4)O2)C)\C
InChI
InChI=1S/C27H32O8/c1-17-8-10-26-15-32-24(30)13-18(2)9-11-31-22(28)6-4-5-7-23(29)35-19-14-21(34-20(26)12-17)27(16-33-27)25(19,26)3/h4-7,12-13,19-21H,8-11,14-16H2,1-3H3/b6-4+,7-5-,18-13+/t19-,20-,21-,25-,26-,27+/m1/s1
InChIKey
GXCGYHWSYNQVHU-GYDJLPFWSA-N
Synonyms
Verrucarin J; Muconomycin B; 4643-58-7; 62UBU5Q68G; (1R,3R,8R,12E,18E,20Z,24R,25S,26S)-5,13,25-trimethylspiro[2,10,16,23-tetraoxatetracyclo[22.2.1.03,8.08,25]heptacosa-4,12,18,20-tetraene-26,2'-oxirane]-11,17,22-trione; Verrucarin A, 2',3'-didehydro-2'-deoxy-, (2'E)-; Verrucrin J; Verrucarin J, stereoisomer; VERRUCARIN J [MI]; UNII-62UBU5Q68G; SCHEMBL258631; CHEMBL507752; CHEBI:184115; HY-N10113; 2',3'-Didehydro-2'-deoxyverrucarin A; AI3-29711; CS-0255891; Q27263516
CAS 4643-58-7
PubChem CID 12444784
ChEMBL ID CHEMBL507752
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Trichothecenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 484.5 ALogp: 2.5
HBD: 0 HBA: 8
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 101.0 Aromatic Rings: 5
Heavy Atoms: 35 QED Weighted: 0.221

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.211 MDCK Permeability: 0.00001730
Pgp-inhibitor: 0.149 Pgp-substrate: 0.982
Human Intestinal Absorption (HIA): 0.005 20% Bioavailability (F20%): 0.953
30% Bioavailability (F30%): 0.827

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.842 Plasma Protein Binding (PPB): 82.00%
Volume Distribution (VD): 1.352 Fu: 9.61%

ADMET: Metabolism

CYP1A2-inhibitor: 0.45 CYP1A2-substrate: 0.123
CYP2C19-inhibitor: 0.927 CYP2C19-substrate: 0.516
CYP2C9-inhibitor: 0.94 CYP2C9-substrate: 0.028
CYP2D6-inhibitor: 0.795 CYP2D6-substrate: 0.052
CYP3A4-inhibitor: 0.943 CYP3A4-substrate: 0.511

ADMET: Excretion

Clearance (CL): 2.899 Half-life (T1/2): 0.383

ADMET: Toxicity

hERG Blockers: 0.158 Human Hepatotoxicity (H-HT): 0.619
Drug-inuced Liver Injury (DILI): 0.314 AMES Toxicity: 0.815
Rat Oral Acute Toxicity: 0.47 Maximum Recommended Daily Dose: 0.955
Skin Sensitization: 0.953 Carcinogencity: 0.073
Eye Corrosion: 0.008 Eye Irritation: 0.227
Respiratory Toxicity: 0.419
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003126 0.763 D0C7JF 0.231
ENC004774 0.752 D0Q4SD 0.221
ENC002696 0.746 D0G8BV 0.218
ENC003943 0.675 D0Z4ZT 0.215
ENC004775 0.672 D0V4WD 0.214
ENC004446 0.606 D0D2VS 0.214
ENC003173 0.586 D04GJN 0.212
ENC002026 0.580 D0EP0C 0.209
ENC002050 0.571 D09WYX 0.208
ENC003310 0.489 D06XHC 0.207
*Note: the compound similarity was calculated by RDKIT.