NPs Basic Information

Name
Cucumin F
Molecular Formula C15H22O2
IUPAC Name*
(3bR,6aS,7S,7aS)-7-hydroxy-3,5,5,7a-tetramethyl-1,3b,4,6,6a,7-hexahydrocyclopenta[a]pentalen-2-one
SMILES
CC1=C2[C@@H]3CC(C[C@@H]3[C@@H]([C@]2(CC1=O)C)O)(C)C
InChI
InChI=1S/C15H22O2/c1-8-11(16)7-15(4)12(8)9-5-14(2,3)6-10(9)13(15)17/h9-10,13,17H,5-7H2,1-4H3/t9-,10+,13+,15+/m1/s1
InChIKey
MCUHUORHNRBSNW-BILRFKGYSA-N
Synonyms
Cucumin F
CAS NA
PubChem CID 10752178
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Linear triquinanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 234.33 ALogp: 2.1
HBD: 1 HBA: 2
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 37.3 Aromatic Rings: 3
Heavy Atoms: 17 QED Weighted: 0.696

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.755 MDCK Permeability: 0.00003540
Pgp-inhibitor: 0.122 Pgp-substrate: 0.003
Human Intestinal Absorption (HIA): 0.01 20% Bioavailability (F20%): 0.011
30% Bioavailability (F30%): 0.001

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.528 Plasma Protein Binding (PPB): 79.78%
Volume Distribution (VD): 0.585 Fu: 31.98%

ADMET: Metabolism

CYP1A2-inhibitor: 0.048 CYP1A2-substrate: 0.652
CYP2C19-inhibitor: 0.138 CYP2C19-substrate: 0.874
CYP2C9-inhibitor: 0.062 CYP2C9-substrate: 0.144
CYP2D6-inhibitor: 0.021 CYP2D6-substrate: 0.131
CYP3A4-inhibitor: 0.19 CYP3A4-substrate: 0.442

ADMET: Excretion

Clearance (CL): 16.355 Half-life (T1/2): 0.121

ADMET: Toxicity

hERG Blockers: 0.021 Human Hepatotoxicity (H-HT): 0.237
Drug-inuced Liver Injury (DILI): 0.103 AMES Toxicity: 0.015
Rat Oral Acute Toxicity: 0.732 Maximum Recommended Daily Dose: 0.585
Skin Sensitization: 0.192 Carcinogencity: 0.736
Eye Corrosion: 0.062 Eye Irritation: 0.09
Respiratory Toxicity: 0.928
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005896 0.579 D04SFH 0.256
ENC004209 0.508 D0H1QY 0.254
ENC005897 0.476 D0K7LU 0.253
ENC004207 0.460 D0Q6NZ 0.247
ENC002919 0.415 D0Z1XD 0.247
ENC002941 0.373 D0D2TN 0.242
ENC003682 0.373 D04GJN 0.242
ENC002225 0.354 D0G8BV 0.239
ENC004042 0.351 D0K0EK 0.238
ENC002346 0.344 D06XMU 0.238
*Note: the compound similarity was calculated by RDKIT.