NPs Basic Information

Name
Nonaprenyl-4-hydroxybenzoate
Molecular Formula C52H78O3
IUPAC Name*
4-hydroxy-3-[(2E,6E,10E,14E,18E,22E,26E,30E)-3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaenyl]benzoic acid
SMILES
CC(=CCC/C(=C/CC/C(=C/CC/C(=C/CC/C(=C/CC/C(=C/CC/C(=C/CC/C(=C/CC/C(=C/CC1=C(C=CC(=C1)C(=O)O)O)/C)/C)/C)/C)/C)/C)/C)/C)C
InChI
InChI=1S/C52H78O3/c1-40(2)19-11-20-41(3)21-12-22-42(4)23-13-24-43(5)25-14-26-44(6)27-15-28-45(7)29-16-30-46(8)31-17-32-47(9)33-18-34-48(10)35-36-49-39-50(52(54)55)37-38-51(49)53/h19,21,23,25,27,29,31,33,35,37-39,53H,11-18,20,22,24,26,28,30,32,34,36H2,1-10H3,(H,54,55)/b41-21+,42-23+,43-25+,44-27+,45-29+,46-31+,47-33+,48-35+
InChIKey
YKKKMRBEPIZPBH-XWEAJCOCSA-N
Synonyms
Nonaprenyl-4-hydroxybenzoate; Pphb-9; 3-Nonaprenyl-4-hydroxybenzoate; 38332-13-7; 4-hydroxy-3-all-trans-nonaprenylbenzoic acid; 4-hydroxy-3-[(2E,6E,10E,14E,18E,22E,26E,30E)-3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaenyl]benzoic acid; C03885; AC1O5ZN2; CHEBI:84501; 3-nonaprenyl-4-hydroxybenzoic acid; Q27157805; 4-hydroxy-3-[(2E,6E,10E,14E,18E,22E,26E,30E)-3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaen-1-yl]benzoic acid; Benzoic acid, 4-hydroxy-3-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl)-
CAS 38332-13-7
PubChem CID 6443777
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Polyprenylphenols
          • Direct Parent: Polyprenylphenols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 751.2 ALogp: 17.9
HBD: 2 HBA: 3
Rotatable Bonds: 27 Lipinski's rule of five: Rejected
Polar Surface Area: 57.5 Aromatic Rings: 1
Heavy Atoms: 55 QED Weighted: 0.07

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.244 MDCK Permeability: 0.00000748
Pgp-inhibitor: 0 Pgp-substrate: 0.44
Human Intestinal Absorption (HIA): 0.987 20% Bioavailability (F20%): 0.025
30% Bioavailability (F30%): 0.921

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.001 Plasma Protein Binding (PPB): 100.91%
Volume Distribution (VD): -0.198 Fu: 0.24%

ADMET: Metabolism

CYP1A2-inhibitor: 0.048 CYP1A2-substrate: 0.127
CYP2C19-inhibitor: 0.14 CYP2C19-substrate: 0.037
CYP2C9-inhibitor: 0.091 CYP2C9-substrate: 0.997
CYP2D6-inhibitor: 0.073 CYP2D6-substrate: 0.259
CYP3A4-inhibitor: 0.166 CYP3A4-substrate: 0.031

ADMET: Excretion

Clearance (CL): 1.42 Half-life (T1/2): 0.155

ADMET: Toxicity

hERG Blockers: 0.003 Human Hepatotoxicity (H-HT): 0.851
Drug-inuced Liver Injury (DILI): 0.001 AMES Toxicity: 0
Rat Oral Acute Toxicity: 0 Maximum Recommended Daily Dose: 0.901
Skin Sensitization: 0.992 Carcinogencity: 0.001
Eye Corrosion: 0.003 Eye Irritation: 0.319
Respiratory Toxicity: 0
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001427 0.490 D01ZUA 0.658
ENC006119 0.312 D09XWD 0.400
ENC001465 0.310 D05XQE 0.301
ENC001466 0.310 D03VFL 0.299
ENC004068 0.298 D00FSV 0.174
ENC003494 0.286 D0Q0PR 0.173
ENC003714 0.270 D06BLQ 0.173
ENC001464 0.269 D03LGG 0.151
ENC001716 0.268 D0U5CE 0.151
ENC003133 0.262 D0OR6A 0.148
*Note: the compound similarity was calculated by RDKIT.