NPs Basic Information

Name
Verticillin
Molecular Formula C30H28N6O4S4
IUPAC Name*
(1S,3R,11R,14S)-3-[(1S,3R,11R,14S)-14,18-dimethyl-13,17-dioxo-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.01,12.03,11.04,9]octadeca-4,6,8-trien-3-yl]-14,18-dimethyl-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.01,12.03,11.04,9]octadeca-4,6,8-triene-13,17-dione
SMILES
C[C@]12C(=O)N3[C@@H]4[C@](C[C@@]3(C(=O)N1C)SS2)(C5=CC=CC=C5N4)[C@]67C[C@]89C(=O)N([C@](C(=O)N8[C@H]6NC1=CC=CC=C71)(SS9)C)C
InChI
InChI=1S/C30H28N6O4S4/c1-25-21(37)35-19-27(15-9-5-7-11-17(15)31-19,13-29(35,43-41-25)23(39)33(25)3)28-14-30-24(40)34(4)26(2,42-44-30)22(38)36(30)20(28)32-18-12-8-6-10-16(18)28/h5-12,19-20,31-32H,13-14H2,1-4H3/t19-,20-,25+,26+,27+,28+,29+,30+/m1/s1
InChIKey
PVVLIIZIQXDFSP-PNVYSBBASA-N
Synonyms
Verticillin; 11,11'-Dideoxyverticillin A; CHEMBL2172426; 12795-76-5; (1S,3R,11R,14S)-3-[(1S,3R,11R,14S)-14,18-dimethyl-13,17-dioxo-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.01,12.03,11.04,9]octadeca-4,6,8-trien-3-yl]-14,18-dimethyl-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.01,12.03,11.04,9]octadeca-4,6,8-triene-13,17-dione; Verticillins; 19,19'-Dideoxychetocin; UNII-BDQ3M208XA; BDQ3M208XA; ZH-4B; L03PG2D98P; SCHEMBL20796090; BDBM50396026; (+)-11,11'-DIDEOXYVERTICILLIN A; 11,11'-DIDEOXYVERTICILLIN A, (+)-; (10B,10'B(11H,11'H)-BI-3,11A-EPIDITHIO-11AH-PYRAZINO(1',2':1,5)PYRROLO(2,3-B)INDOLE)-1,1',4,4'-TETRONE, 2,2',3,3',5A,5'A,6,6'-OCTAHYDRO-2,2',3,3'-TETRAMETHYL-, (3S,3'S,5AR,5'AR,10BR,10'BR,11AS,11'AS)-; (3S,3'S,5AR,5'AR,10BR,10'BR,11AS,11'AS)-2,2',3,3',5A,5'A,6,6'-OCTAHYDRO-2,2',3,3'-TETRAMETHYL(10B,10'B(11H,11'H)-BI-3,11A-EPIDITHIO-11AH-PYRAZINO(1',2':1,5)PYRROLO(2,3-B)INDOLE)-1,1',4,4'-TETRONE
CAS 12795-76-5
PubChem CID 3084126
ChEMBL ID CHEMBL2172426
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Indoles and derivatives
        • Subclass: Pyrroloindoles
          • Direct Parent: Pyrroloindoles

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 664.9 ALogp: 3.0
HBD: 2 HBA: 10
Rotatable Bonds: 1 Lipinski's rule of five: Rejected
Polar Surface Area: 207.0 Aromatic Rings: 12
Heavy Atoms: 44 QED Weighted: 0.433

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.451 MDCK Permeability: 0.00001420
Pgp-inhibitor: 0.992 Pgp-substrate: 0.004
Human Intestinal Absorption (HIA): 0.753 20% Bioavailability (F20%): 0.79
30% Bioavailability (F30%): 0.994

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.1 Plasma Protein Binding (PPB): 86.44%
Volume Distribution (VD): 1.346 Fu: 4.41%

ADMET: Metabolism

CYP1A2-inhibitor: 0.011 CYP1A2-substrate: 0.196
CYP2C19-inhibitor: 0.98 CYP2C19-substrate: 0.96
CYP2C9-inhibitor: 0.985 CYP2C9-substrate: 0.205
CYP2D6-inhibitor: 0.644 CYP2D6-substrate: 0.058
CYP3A4-inhibitor: 0.976 CYP3A4-substrate: 0.991

ADMET: Excretion

Clearance (CL): 9.061 Half-life (T1/2): 0.013

ADMET: Toxicity

hERG Blockers: 0.001 Human Hepatotoxicity (H-HT): 0.798
Drug-inuced Liver Injury (DILI): 0.994 AMES Toxicity: 0.006
Rat Oral Acute Toxicity: 0.862 Maximum Recommended Daily Dose: 0.78
Skin Sensitization: 0.92 Carcinogencity: 0.116
Eye Corrosion: 0.003 Eye Irritation: 0.005
Respiratory Toxicity: 0.002
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004848 0.874 D0E0RY 0.240
ENC003176 0.658 D01TSI 0.235
ENC003588 0.623 D0SP3D 0.230
ENC003382 0.584 D0V3ZA 0.229
ENC003381 0.577 D0V9WF 0.223
ENC004849 0.512 D09NNH 0.223
ENC003530 0.511 D0W7RJ 0.216
ENC003490 0.506 D03KQF 0.216
ENC003455 0.471 D08FTG 0.210
ENC002642 0.436 D07NVU 0.210
*Note: the compound similarity was calculated by RDKIT.